Difference between revisions of "TSS:Hg 105517.1"
From referenceTSS
| Line 6: | Line 6: | ||
|distance_to_tss=200 | |distance_to_tss=200 | ||
|end=72893763 | |end=72893763 | ||
| + | |end_of_center_position=72893756 | ||
|entrez_id=170392 | |entrez_id=170392 | ||
|gc_percent=0.482587 | |gc_percent=0.482587 | ||
| Line 24: | Line 25: | ||
|species=human | |species=human | ||
|start=72893748 | |start=72893748 | ||
| + | |start_of_center_position=72893755 | ||
|strand=+ | |strand=+ | ||
|tata_box="-51(GGCCTTAAAAAA,-,0.00)" | |tata_box="-51(GGCCTTAAAAAA,-,0.00)" | ||
Revision as of 05:03, 12 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 72893755 |
|---|---|
| End of the center position in the TSS region: | 72893756 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AY013707 |
|---|---|
| Distance: | -24 |
| Num_trans: | 12 |
| All_trans: | AY013707:-24 KJ903964:36 HQ258178:36 AY358339:-146 ENST00000622652.1:-165 uc057tze.1:-165 BC126440:-165 ENST00000334011.9:-168 uc001jte.2:-168 AK096435:-168 NM_152635:-193 NR_130125:-193 |
TATA-Box annotation
| Distance to TSS: | 200 |
|---|---|
| Nearest PromoterID: | NR_130125 |
| Entrez ID: | 170392 |
| Nearest Unigene: | Hs.8366 |
| Nearest Refseq: | NM_152635 |
| Nearest Ensembl: | ENSG00000138315 |
| Gene Name: | oncoprotein induced transcript 3 |
| Gene Alias: | LZP |
| Gene Description: | oncoprotein induced transcript 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.482587 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-51(GGCCTTAAAAAA,-,0.00)" |
