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Difference between revisions of "TSS:Hg 105850.1"

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Line 6: Line 6:
 
|distance_to_tss=-303
 
|distance_to_tss=-303
 
|end=80207417
 
|end=80207417
 +
|end_of_center_position=80207407
 
|entrez_id=439990
 
|entrez_id=439990
 
|gc_percent=0.587065
 
|gc_percent=0.587065
Line 24: Line 25:
 
|species=human
 
|species=human
 
|start=80207396
 
|start=80207396
 +
|start_of_center_position=80207406
 
|strand=+
 
|strand=+
 
|transcript_name=ENST00000422847.1 NR_038464 uc001kbv.3 BC048265
 
|transcript_name=ENST00000422847.1 NR_038464 uc001kbv.3 BC048265

Revision as of 05:56, 12 May 2019

Basic information about the TSS


TSS ID:hg_105850.1
Species:human
Chr:chr10
TSS Classification:yes
Start:80207396
End:80207417
Strand:+
TSS Score:1
Start of the center position in the TSS region:80207406
End of the center position in the TSS region:80207407



Gene and protein annotation


Transcript_name:ENST00000422847.1 NR_038464 uc001kbv.3 BC048265
Distance:293
GeneID:439990
HGNC/MGI_ID:HGNC:45114
UniProt_ID:
Gene_name:long intergenic non-protein coding RNA 857
Gene_symbol:LINC00857
Gene_synonyms:
Gene_source:HGNC:45114



Transcript annotation


Transcript_name:ENST00000422847.1 NR_038464 uc001kbv.3 BC048265
Distance:293
Num_trans:4
All_trans:ENST00000422847.1:293 NR_038464:293 uc001kbv.3:293 BC048265:293



TATA-Box annotation


Distance to TSS:-303
Nearest PromoterID:NR_038464
Entrez ID:439990
Nearest Unigene:Hs.365566
Nearest Refseq:NR_038464
Nearest Ensembl:ENSG00000237523
Gene Name:long intergenic non-protein coding RNA 857
Gene Alias:-
Gene Description:long intergenic non-protein coding RNA 857
Gene Type:ncRNA
CpG%:0.045
GC%:0.587065
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):