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Difference between revisions of "TSS:Hg 105926.1"

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Line 11: Line 11:
 
|distance_to_tss=75
 
|distance_to_tss=75
 
|end=84139517
 
|end=84139517
 +
|end_of_center_position=84139505
 
|entrez_id=27069
 
|entrez_id=27069
 
|gc_percent=0.631841
 
|gc_percent=0.631841
|gene_alias=DERP2|HSPC282|MICS1|My021|PTD010|TMBIM5
+
|gene_alias=DERP2
 
|gene_description=growth hormone inducible transmembrane protein
 
|gene_description=growth hormone inducible transmembrane protein
 
|gene_id=27069
 
|gene_id=27069
Line 29: Line 30:
 
|species=human
 
|species=human
 
|start=84139491
 
|start=84139491
 +
|start_of_center_position=84139504
 
|strand=+
 
|strand=+
 
|transcript_name=ENST00000618907.3 uc057uon.1 AF131820 AF078863
 
|transcript_name=ENST00000618907.3 uc057uon.1 AF131820 AF078863

Revision as of 06:05, 12 May 2019

Basic information about the TSS


TSS ID:hg_105926.1
Species:human
Chr:chr10
TSS Classification:yes
Start:84139491
End:84139517
Strand:+
TSS Score:1
Start of the center position in the TSS region:84139504
End of the center position in the TSS region:84139505



Gene and protein annotation


Transcript_name:ENST00000618907.3 uc057uon.1 AF131820 AF078863
Distance:0
GeneID:27069
HGNC/MGI_ID:HGNC:17281
UniProt_ID:Q9Y6G2
Gene_name:growth hormone inducible transmembrane protein
Gene_symbol:GHITM
Gene_synonyms:DERP2 HSPC282 My021 PTD010 TMBIM5
Gene_source:HGNC:17281



Transcript annotation


Transcript_name:ENST00000618907.3 uc057uon.1 AF131820 AF078863
Distance:0
Num_trans:21
All_trans:ENST00000618907.3:0 uc057uon.1:0 AF131820:0 AF078863:0 AL136713:2 AF161400:3 AK299937:-8 AK130094:9 BC022872:31 AK225318:35 AF060923:38 AK298332:39 AK098770:39 BC010354:42 AK130097:44 AK297960:45 AK292864:46 AY358824:49 ENST00000372134.5:-52 uc001kcs.2:-52 NM_014394:-63



TATA-Box annotation


Distance to TSS:75
Nearest PromoterID:NM_014394
Entrez ID:27069
Nearest Unigene:Hs.352656
Nearest Refseq:NM_014394
Nearest Ensembl:ENSG00000165678
Gene Name:growth hormone inducible transmembrane protein
Gene Alias:DERP2
Gene Description:growth hormone inducible transmembrane protein
Gene Type:protein-coding
CpG%:0.095
GC%:0.631841
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):