Difference between revisions of "TSS:Hg 105939.1"
From referenceTSS
| Line 5: | Line 5: | ||
|distance_to_tss=-4959 | |distance_to_tss=-4959 | ||
|end=84230571 | |end=84230571 | ||
| + | |end_of_center_position=84230549 | ||
|entrez_id=340745 | |entrez_id=340745 | ||
|gc_percent=0.38806 | |gc_percent=0.38806 | ||
| Line 18: | Line 19: | ||
|species=human | |species=human | ||
|start=84230525 | |start=84230525 | ||
| + | |start_of_center_position=84230548 | ||
|strand=+ | |strand=+ | ||
|tata_box="80(GGCTTTATAAAT,-,0.00)" | |tata_box="80(GGCTTTATAAAT,-,0.00)" | ||
Revision as of 06:07, 12 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 84230548 |
|---|---|
| End of the center position in the TSS region: | 84230549 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -4959 |
|---|---|
| Nearest PromoterID: | NM_001017924 |
| Entrez ID: | 340745 |
| Nearest Unigene: | Hs.450425 |
| Nearest Refseq: | NM_001017924 |
| Nearest Ensembl: | ENSG00000204033 |
| Gene Name: | LRIT2 |
| Gene Alias: | LRRC22 |
| Gene Description: | "leucine rich repeat, Ig-like and transmembrane domains 2" |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.38806 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "80(GGCTTTATAAAT,-,0.00)" |
