Difference between revisions of "TSS:Hg 105970.1"
From referenceTSS
| Line 6: | Line 6: | ||
|distance_to_tss=33 | |distance_to_tss=33 | ||
|end=86654599 | |end=86654599 | ||
| + | |end_of_center_position=86654591 | ||
|entrez_id=94233 | |entrez_id=94233 | ||
|gc_percent=0.567164 | |gc_percent=0.567164 | ||
| Line 24: | Line 25: | ||
|species=human | |species=human | ||
|start=86654581 | |start=86654581 | ||
| + | |start_of_center_position=86654590 | ||
|strand=+ | |strand=+ | ||
|tata_box="-76(CGCTATATAAAG,-,0.00)" | |tata_box="-76(CGCTATATAAAG,-,0.00)" | ||
Revision as of 06:12, 12 May 2019
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 86654590 |
|---|---|
| End of the center position in the TSS region: | 86654591 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000241891.9 ENST00000443292.1 uc001kdq.4 uc057uqf.1 BC029291 |
|---|---|
| Distance: | 18 |
| Num_trans: | 13 |
| All_trans: | ENST00000241891.9:18 ENST00000443292.1:18 uc001kdq.4:18 uc057uqf.1:18 BC029291:18 ENST00000372071.6:-25 NM_033282:-25 NM_001030015:-25 uc001kdp.4:-25 DQ426884:-33 BC113558:129 BC143688:129 KJ899974:184 |
TATA-Box annotation
| Distance to TSS: | 33 |
|---|---|
| Nearest PromoterID: | NM_033282 |
| Entrez ID: | 94233 |
| Nearest Unigene: | Hs.283922 |
| Nearest Refseq: | NM_033282 |
| Nearest Ensembl: | ENSG00000122375 |
| Gene Name: | opsin 4 |
| Gene Alias: | MOP |
| Gene Description: | opsin 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.567164 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-76(CGCTATATAAAG,-,0.00)" |
