Difference between revisions of "TSS:Hg 105971.1"
From referenceTSS
| Line 16: | Line 16: | ||
|distance_to_tss=-1661 | |distance_to_tss=-1661 | ||
|end=86666799 | |end=86666799 | ||
| + | |end_of_center_position=86666788 | ||
|entrez_id=11155 | |entrez_id=11155 | ||
|gc_percent=0.651741 | |gc_percent=0.651741 | ||
| − | |gene_alias=CMD1C | + | |gene_alias=CMD1C |
|gene_description=LIM domain binding 3 | |gene_description=LIM domain binding 3 | ||
|gene_id=11155 | |gene_id=11155 | ||
| Line 34: | Line 35: | ||
|species=human | |species=human | ||
|start=86666776 | |start=86666776 | ||
| + | |start_of_center_position=86666787 | ||
|strand=+ | |strand=+ | ||
|tata_box="-35(GCCTTTAAGAGC,-,0.00),-34(CCTTTAAGAGCA,+,0.00)" | |tata_box="-35(GCCTTTAAGAGC,-,0.00),-34(CCTTTAAGAGCA,+,0.00)" | ||
Revision as of 06:12, 12 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 86666787 |
|---|---|
| End of the center position in the TSS region: | 86666788 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK294696 |
|---|---|
| Distance: | 0 |
| Num_trans: | 1 |
| All_trans: | AK294696:0 |
TATA-Box annotation
| Distance to TSS: | -1661 |
|---|---|
| Nearest PromoterID: | NM_001171610 |
| Entrez ID: | 11155 |
| Nearest Unigene: | Hs.657271 |
| Nearest Refseq: | NM_007078 |
| Nearest Ensembl: | ENSG00000122367 |
| Gene Name: | LIM domain binding 3 |
| Gene Alias: | CMD1C |
| Gene Description: | LIM domain binding 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.651741 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-35(GCCTTTAAGAGC,-,0.00),-34(CCTTTAAGAGCA,+,0.00)" |
