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Difference between revisions of "TSS:Hg 106464.1"

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Line 7: Line 7:
 
|distance_to_tss=35
 
|distance_to_tss=35
 
|end=97737197
 
|end=97737197
 +
|end_of_center_position=97737157
 
|entrez_id=118813
 
|entrez_id=118813
 
|gc_percent=0.681592
 
|gc_percent=0.681592
−
|gene_alias=PROTRUDIN|SPG33
+
|gene_alias=PROTRUDIN
 
|gene_description=zinc finger FYVE-type containing 27
 
|gene_description=zinc finger FYVE-type containing 27
 
|gene_id=118813
 
|gene_id=118813
Line 25: Line 26:
 
|species=human
 
|species=human
 
|start=97737115
 
|start=97737115
 +
|start_of_center_position=97737156
 
|strand=+
 
|strand=+
 
|transcript_name=ENST00000337540.11 ENST00000370613.7 ENST00000370610.7 ENST00000357540.8 ENST00000393677.8 ENST00000423811.3 ENST00000359980.5 ENST00000462887.1 NM_144588 NM_001174119 NM_001174122 NM_001174120 NM_001002262 NM_001174121 uc010qpd.3 uc001koq.4 uc010qpb.3 uc010qpa.3 uc001kol.3 uc057vgi.1 uc001kom.3 uc057vgj.1 AK296295 AK057481 AK300438 AK299735 AK097945 BC030621 AK074876 AK296588 BX647836
 
|transcript_name=ENST00000337540.11 ENST00000370613.7 ENST00000370610.7 ENST00000357540.8 ENST00000393677.8 ENST00000423811.3 ENST00000359980.5 ENST00000462887.1 NM_144588 NM_001174119 NM_001174122 NM_001174120 NM_001002262 NM_001174121 uc010qpd.3 uc001koq.4 uc010qpb.3 uc010qpa.3 uc001kol.3 uc057vgi.1 uc001kom.3 uc057vgj.1 AK296295 AK057481 AK300438 AK299735 AK097945 BC030621 AK074876 AK296588 BX647836

Revision as of 07:30, 12 May 2019

Basic information about the TSS

TSS ID:hg_106464.1
Species:human
Chr:chr10
TSS Classification:yes
Start:97737115
End:97737197
Strand:+
TSS Score:1
Start of the center position in the TSS region:97737156
End of the center position in the TSS region:97737157



Gene and protein annotation

Transcript_name:ENST00000337540.11 ENST00000370613.7 ENST00000370610.7 ENST00000357540.8 ENST00000393677.8 ENST00000423811.3 ENST00000359980.5 ENST00000462887.1 NM_144588 NM_001174119 NM_001174122 NM_001174120 NM_001002262 NM_001174121 uc010qpd.3 uc001koq.4 uc010qpb.3 uc010qpa.3 uc001kol.3 uc057vgi.1 uc001kom.3 uc057vgj.1 AK296295 AK057481 AK300438 AK299735 AK097945 BC030621 AK074876 AK296588 BX647836
Distance:0
GeneID:118813
HGNC/MGI_ID:HGNC:26559
UniProt_ID:B7Z6J9 Q5T4F4 X6RII9
Gene_name:zinc finger FYVE-type containing 27
Gene_symbol:ZFYVE27
Gene_synonyms:FLJ32919 SPG33
Gene_source:HGNC:26559



Transcript annotation

Transcript_name:ENST00000337540.11 ENST00000370613.7 ENST00000370610.7 ENST00000357540.8 ENST00000393677.8 ENST00000423811.3 ENST00000359980.5 ENST00000462887.1 NM_144588 NM_001174119 NM_001174122 NM_001174120 NM_001002262 NM_001174121 uc010qpd.3 uc001koq.4 uc010qpb.3 uc010qpa.3 uc001kol.3 uc057vgi.1 uc001kom.3 uc057vgj.1 AK296295 AK057481 AK300438 AK299735 AK097945 BC030621 AK074876 AK296588 BX647836
Distance:0
Num_trans:31
All_trans:ENST00000337540.11:0 ENST00000370613.7:0 ENST00000370610.7:0 ENST00000357540.8:0 ENST00000393677.8:0 ENST00000423811.3:0 ENST00000359980.5:0 ENST00000462887.1:0 NM_144588:0 NM_001174119:0 NM_001174122:0 NM_001174120:0 NM_001002262:0 NM_001174121:0 uc010qpd.3:0 uc001koq.4:0 uc010qpb.3:0 uc010qpa.3:0 uc001kol.3:0 uc057vgi.1:0 uc001kom.3:0 uc057vgj.1:0 AK296295:0 AK057481:0 AK300438:0 AK299735:0 AK097945:0 BC030621:0 AK074876:0 AK296588:0 BX647836:0



TATA-Box annotation

Distance to TSS:35
Nearest PromoterID:NM_001174120
Entrez ID:118813
Nearest Unigene:Hs.744075
Nearest Refseq:NM_144588
Nearest Ensembl:ENSG00000155256
Gene Name:zinc finger FYVE-type containing 27
Gene Alias:PROTRUDIN
Gene Description:zinc finger FYVE-type containing 27
Gene Type:protein-coding
CpG%:0.125
GC%:0.681592
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):
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