Difference between revisions of "TSS:Hg 106619.1"
From referenceTSS
| Line 7: | Line 7: | ||
|distance_to_tss=397 | |distance_to_tss=397 | ||
|end=100912977 | |end=100912977 | ||
| + | |end_of_center_position=100912967 | ||
|entrez_id=55719 | |entrez_id=55719 | ||
|gc_percent=0.61194 | |gc_percent=0.61194 | ||
| − | |gene_alias=C10orf6 | + | |gene_alias=C10orf6 |
|gene_description=SMC5-SMC6 complex localization factor 2 | |gene_description=SMC5-SMC6 complex localization factor 2 | ||
|gene_id=55719 | |gene_id=55719 | ||
| Line 25: | Line 26: | ||
|species=human | |species=human | ||
|start=100912955 | |start=100912955 | ||
| + | |start_of_center_position=100912966 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000370271.7 uc001krr.2 AL833126 AL832343 BC015131 BC047715 | |transcript_name=ENST00000370271.7 uc001krr.2 AL833126 AL832343 BC015131 BC047715 | ||
Revision as of 07:52, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 100912966 |
|---|---|
| End of the center position in the TSS region: | 100912967 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000370271.7 uc001krr.2 AL833126 AL832343 BC015131 BC047715 |
|---|---|
| Distance: | 0 |
| Num_trans: | 25 |
| All_trans: | ENST00000370271.7:0 uc001krr.2:0 AL833126:0 AL832343:0 BC015131:0 BC047715:0 ENST00000370269.3:2 uc001krs.4:2 BC030565:2 BC064526:2 AK292565:-4 BC020915:10 ENST00000609386.1:19 uc001krq.5:19 BC073832:19 AL832383:24 AB385255:133 BC160007:133 ENST00000238961.8:-387 NM_001136123:-387 NM_001243770:-387 NM_018121:-387 uc001krt.5:-387 AF460992:-387 AF460991:-387 |
TATA-Box annotation
| Distance to TSS: | 397 |
|---|---|
| Nearest PromoterID: | NM_001243770 |
| Entrez ID: | 55719 |
| Nearest Unigene: | Hs.447458 |
| Nearest Refseq: | NM_018121 |
| Nearest Ensembl: | ENSG00000119906 |
| Gene Name: | SMC5-SMC6 complex localization factor 2 |
| Gene Alias: | C10orf6 |
| Gene Description: | SMC5-SMC6 complex localization factor 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.07 |
| GC%: | 0.61194 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
