Difference between revisions of "TSS:Hg 220177.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000593908.5:-14 ENST00000601386.5:-14 ENST00000428099.5:-14 NM_001288724:-14 uc057vpk.1:-14 uc057vpl.1:-14 uc001kva.4:-14 BC002844:449 NM_00107749...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |H2TF1= | ||
| + | |LYT-10= | ||
| + | |LYT10= | ||
| + | |NF-kB2= | ||
|all_trans=ENST00000593908.5:-14 ENST00000601386.5:-14 ENST00000428099.5:-14 NM_001288724:-14 uc057vpk.1:-14 uc057vpl.1:-14 uc001kva.4:-14 BC002844:449 NM_001077494:454 ENST00000369966.7:473 uc001kvb.6:473 S76638:473 | |all_trans=ENST00000593908.5:-14 ENST00000601386.5:-14 ENST00000428099.5:-14 NM_001288724:-14 uc057vpk.1:-14 uc057vpl.1:-14 uc001kva.4:-14 BC002844:449 NM_001077494:454 ENST00000369966.7:473 uc001kvb.6:473 S76638:473 | ||
|chr=chr10 | |chr=chr10 | ||
| Line 6: | Line 10: | ||
|distance_to_tss=14 | |distance_to_tss=14 | ||
|end=102394124 | |end=102394124 | ||
| + | |end_of_center_position=102394124 | ||
|entrez_id=4791 | |entrez_id=4791 | ||
|gc_percent=0.706468 | |gc_percent=0.706468 | ||
| − | |gene_alias=CVID10 | + | |gene_alias=CVID10 |
|gene_description=nuclear factor kappa B subunit 2 | |gene_description=nuclear factor kappa B subunit 2 | ||
|gene_id=4791 | |gene_id=4791 | ||
| Line 22: | Line 27: | ||
|nearest_unigene=Hs.73090 | |nearest_unigene=Hs.73090 | ||
|num_trans=12 | |num_trans=12 | ||
| + | |p100= | ||
| + | |p49/p100= | ||
| + | |p52= | ||
|species=human | |species=human | ||
|start=102394123 | |start=102394123 | ||
| + | |start_of_center_position=102394123 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000593908.5 ENST00000601386.5 ENST00000428099.5 NM_001288724 uc057vpk.1 uc057vpl.1 uc001kva.4 | |transcript_name=ENST00000593908.5 ENST00000601386.5 ENST00000428099.5 NM_001288724 uc057vpk.1 uc057vpl.1 uc001kva.4 | ||
Revision as of 08:06, 12 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 102394123 |
|---|---|
| End of the center position in the TSS region: | 102394124 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000593908.5 ENST00000601386.5 ENST00000428099.5 NM_001288724 uc057vpk.1 uc057vpl.1 uc001kva.4 |
|---|---|
| Distance: | -14 |
| Num_trans: | 12 |
| All_trans: | ENST00000593908.5:-14 ENST00000601386.5:-14 ENST00000428099.5:-14 NM_001288724:-14 uc057vpk.1:-14 uc057vpl.1:-14 uc001kva.4:-14 BC002844:449 NM_001077494:454 ENST00000369966.7:473 uc001kvb.6:473 S76638:473 |
TATA-Box annotation
| Distance to TSS: | 14 |
|---|---|
| Nearest PromoterID: | NM_001322935 |
| Entrez ID: | 4791 |
| Nearest Unigene: | Hs.73090 |
| Nearest Refseq: | NM_002502 |
| Nearest Ensembl: | ENSG00000077150 |
| Gene Name: | nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 |
| Gene Alias: | CVID10 |
| Gene Description: | nuclear factor kappa B subunit 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.706468 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
