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Difference between revisions of "TSS:Hg 106750.1"

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Line 7: Line 7:
 
|distance_to_tss=4665
 
|distance_to_tss=4665
 
|end=102649165
 
|end=102649165
 +
|end_of_center_position=102649160
 
|entrez_id=81603
 
|entrez_id=81603
 
|gc_percent=0.562189
 
|gc_percent=0.562189
|gene_alias=GERP|RNF27
+
|gene_alias=GERP
 
|gene_description=tripartite motif containing 8
 
|gene_description=tripartite motif containing 8
 
|gene_id=81603
 
|gene_id=81603
Line 25: Line 26:
 
|species=human
 
|species=human
 
|start=102649154
 
|start=102649154
 +
|start_of_center_position=102649159
 
|strand=+
 
|strand=+
 
|transcript_name=ENST00000487927.5 uc057vra.1
 
|transcript_name=ENST00000487927.5 uc057vra.1

Revision as of 08:14, 12 May 2019

Basic information about the TSS


TSS ID:hg_106750.1
Species:human
Chr:chr10
TSS Classification:yes
Start:102649154
End:102649165
Strand:+
TSS Score:1
Start of the center position in the TSS region:102649159
End of the center position in the TSS region:102649160



Gene and protein annotation


Transcript_name:ENST00000487927.5 uc057vra.1
Distance:54
GeneID:81603
HGNC/MGI_ID:HGNC:15579
UniProt_ID:
Gene_name:tripartite motif containing 8
Gene_symbol:TRIM8
Gene_synonyms:GERP
Gene_source:HGNC:15579



Transcript annotation


Transcript_name:ENST00000487927.5 uc057vra.1
Distance:54
Num_trans:2
All_trans:ENST00000487927.5:54 uc057vra.1:54



TATA-Box annotation


Distance to TSS:4665
Nearest PromoterID:NM_030912
Entrez ID:81603
Nearest Unigene:Hs.336810
Nearest Refseq:NM_030912
Nearest Ensembl:ENSG00000171206
Gene Name:tripartite motif containing 8
Gene Alias:GERP
Gene Description:tripartite motif containing 8
Gene Type:protein-coding
CpG%:0.04
GC%:0.562189
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):