Difference between revisions of "TSS:Mm 99763.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK084665:-21 uc007lzt.1:-41 AK089185:-41 |chr=chr11 |cpg_percent=0.125 |distance=-21 |distance_to_tss=-198 |end=106788706 |entrez_id=13207 |gc_percent=0...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |G17P1= | ||
| + | |HUMP68= | ||
| + | |Hlr1= | ||
|all_trans=AK084665:-21 uc007lzt.1:-41 AK089185:-41 | |all_trans=AK084665:-21 uc007lzt.1:-41 AK089185:-41 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 9: | ||
|distance_to_tss=-198 | |distance_to_tss=-198 | ||
|end=106788706 | |end=106788706 | ||
| + | |end_of_center_position=106788693 | ||
|entrez_id=13207 | |entrez_id=13207 | ||
|gc_percent=0.686567 | |gc_percent=0.686567 | ||
| − | |gene_alias=2600009A06Rik | + | |gene_alias=2600009A06Rik |
|gene_description=DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 | |gene_description=DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 | ||
|gene_id=320162 | |gene_id=320162 | ||
| Line 22: | Line 26: | ||
|nearest_unigene=Mm.491096 | |nearest_unigene=Mm.491096 | ||
|num_trans=3 | |num_trans=3 | ||
| + | |p68= | ||
|species=mouse | |species=mouse | ||
|start=106788678 | |start=106788678 | ||
| + | |start_of_center_position=106788692 | ||
|strand=+ | |strand=+ | ||
|transcript_name=AK084665 | |transcript_name=AK084665 | ||
Revision as of 11:07, 12 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 106788692 |
|---|---|
| End of the center position in the TSS region: | 106788693 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK084665 |
|---|---|
| Distance: | -21 |
| Num_trans: | 3 |
| All_trans: | AK084665:-21 uc007lzt.1:-41 AK089185:-41 |
TATA-Box annotation
| Distance to TSS: | -198 |
|---|---|
| Nearest PromoterID: | NM_007840 |
| Entrez ID: | 13207 |
| Nearest Unigene: | Mm.491096 |
| Nearest Refseq: | NM_007840 |
| Nearest Ensembl: | ENSMUSG00000020719 |
| Gene Name: | centrosomal protein 95 |
| Gene Alias: | 2600009A06Rik |
| Gene Description: | DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 |
| Gene Type: | protein-coding |
| CpG%: | 0.125 |
| GC%: | 0.686567 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
