Difference between revisions of "TSS:Mm 99783.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000154414.1:42 |chr=chr11 |cpg_percent=0.01 |distance=42 |distance_to_tss=132721 |end=107338008 |entrez_id=71795 |gc_percent=0.472637 |gene_ali...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |5830436L09Rik= | ||
| + | |AI662802= | ||
| + | |AI851387= | ||
| + | |C330017I21Rik= | ||
| + | |Dnr411= | ||
| + | |RDGBB= | ||
| + | |RDGBB1= | ||
|all_trans=ENSMUST00000154414.1:42 | |all_trans=ENSMUST00000154414.1:42 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 13: | ||
|distance_to_tss=132721 | |distance_to_tss=132721 | ||
|end=107338008 | |end=107338008 | ||
| + | |end_of_center_position=107337999 | ||
|entrez_id=71795 | |entrez_id=71795 | ||
|gc_percent=0.472637 | |gc_percent=0.472637 | ||
| − | |gene_alias=1110020B03Rik | + | |gene_alias=1110020B03Rik |
|gene_description="phosphatidylinositol transfer protein, cytoplasmic 1" | |gene_description="phosphatidylinositol transfer protein, cytoplasmic 1" | ||
|gene_id= | |gene_id= | ||
| Line 22: | Line 30: | ||
|nearest_unigene=Mm.397413 | |nearest_unigene=Mm.397413 | ||
|num_trans=1 | |num_trans=1 | ||
| + | |rdgB-beta= | ||
|species=mouse | |species=mouse | ||
|start=107337989 | |start=107337989 | ||
| + | |start_of_center_position=107337998 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000154414.1 | |transcript_name=ENSMUST00000154414.1 | ||
Revision as of 11:12, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 107337998 |
|---|---|
| End of the center position in the TSS region: | 107337999 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000154414.1 |
|---|---|
| Distance: | 42 |
| Num_trans: | 1 |
| All_trans: | ENSMUST00000154414.1:42 |
TATA-Box annotation
| Distance to TSS: | 132721 |
|---|---|
| Nearest PromoterID: | NM_145823 |
| Entrez ID: | 71795 |
| Nearest Unigene: | Mm.397413 |
| Nearest Refseq: | NM_145823 |
| Nearest Ensembl: | ENSMUSG00000040430 |
| Gene Name: | predicted gene 11716 |
| Gene Alias: | 1110020B03Rik |
| Gene Description: | "phosphatidylinositol transfer protein, cytoplasmic 1" |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.472637 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
