Difference between revisions of "TSS:Mm 99792.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000136927.1:-46 uc007maq.1:-46 AK146139:-46 |chr=chr11 |cpg_percent=0.025 |distance=-46 |distance_to_tss=42383 |end=107428353 |entrez_id=71795...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |5830436L09Rik= | ||
| + | |AI662802= | ||
| + | |AI851387= | ||
| + | |C330017I21Rik= | ||
| + | |Dnr411= | ||
| + | |RDGBB= | ||
| + | |RDGBB1= | ||
|all_trans=ENSMUST00000136927.1:-46 uc007maq.1:-46 AK146139:-46 | |all_trans=ENSMUST00000136927.1:-46 uc007maq.1:-46 AK146139:-46 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 13: | ||
|distance_to_tss=42383 | |distance_to_tss=42383 | ||
|end=107428353 | |end=107428353 | ||
| + | |end_of_center_position=107428338 | ||
|entrez_id=71795 | |entrez_id=71795 | ||
|gc_percent=0.447761 | |gc_percent=0.447761 | ||
| − | |gene_alias=1110020B03Rik | + | |gene_alias=1110020B03Rik |
|gene_description="phosphatidylinositol transfer protein, cytoplasmic 1" | |gene_description="phosphatidylinositol transfer protein, cytoplasmic 1" | ||
|gene_id= | |gene_id= | ||
| Line 22: | Line 30: | ||
|nearest_unigene=Mm.397413 | |nearest_unigene=Mm.397413 | ||
|num_trans=3 | |num_trans=3 | ||
| + | |rdgB-beta= | ||
|species=mouse | |species=mouse | ||
|start=107428321 | |start=107428321 | ||
| + | |start_of_center_position=107428337 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000136927.1 uc007maq.1 AK146139 | |transcript_name=ENSMUST00000136927.1 uc007maq.1 AK146139 | ||
Revision as of 11:13, 12 May 2019
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 107428337 |
|---|---|
| End of the center position in the TSS region: | 107428338 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000136927.1 uc007maq.1 AK146139 |
|---|---|
| Distance: | -46 |
| Num_trans: | 3 |
| All_trans: | ENSMUST00000136927.1:-46 uc007maq.1:-46 AK146139:-46 |
TATA-Box annotation
| Distance to TSS: | 42383 |
|---|---|
| Nearest PromoterID: | NM_145823 |
| Entrez ID: | 71795 |
| Nearest Unigene: | Mm.397413 |
| Nearest Refseq: | NM_145823 |
| Nearest Ensembl: | ENSMUSG00000040430 |
| Gene Name: | predicted gene 11714 |
| Gene Alias: | 1110020B03Rik |
| Gene Description: | "phosphatidylinositol transfer protein, cytoplasmic 1" |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.447761 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
