Difference between revisions of "TSS:Mm 99799.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000141730.7:0 ENSMUST00000100305.7:0 AB093209:0 ENSMUST00000075012.7:1 NM_198298:1 uc007mau.1:1 uc007mav.1:1 BC076626:1 ENSMUST00000106746.7:9...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |9430093I07Rik= | ||
| + | |9630002H22Rik= | ||
| + | |AI851979= | ||
| + | |DRHC= | ||
|all_trans=ENSMUST00000141730.7:0 ENSMUST00000100305.7:0 AB093209:0 ENSMUST00000075012.7:1 NM_198298:1 uc007mau.1:1 uc007mav.1:1 BC076626:1 ENSMUST00000106746.7:9 | |all_trans=ENSMUST00000141730.7:0 ENSMUST00000100305.7:0 AB093209:0 ENSMUST00000075012.7:1 NM_198298:1 uc007mau.1:1 uc007mav.1:1 BC076626:1 ENSMUST00000106746.7:9 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 10: | ||
|distance_to_tss=-18 | |distance_to_tss=-18 | ||
|end=107547959 | |end=107547959 | ||
| + | |end_of_center_position=107547943 | ||
|entrez_id=78455 | |entrez_id=78455 | ||
|gc_percent=0.621891 | |gc_percent=0.621891 | ||
| − | |gene_alias=3110078M01Rik | + | |gene_alias=3110078M01Rik |
|gene_description=helicase with zinc finger domain | |gene_description=helicase with zinc finger domain | ||
|gene_id=78455 | |gene_id=78455 | ||
| Line 24: | Line 29: | ||
|species=mouse | |species=mouse | ||
|start=107547925 | |start=107547925 | ||
| + | |start_of_center_position=107547942 | ||
|strand=+ | |strand=+ | ||
|tata_box="-43(CACTTTAAAGGC,-,0.00)" | |tata_box="-43(CACTTTAAAGGC,-,0.00)" | ||
Revision as of 11:14, 12 May 2019
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 107547942 |
|---|---|
| End of the center position in the TSS region: | 107547943 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000141730.7 ENSMUST00000100305.7 AB093209 |
|---|---|
| Distance: | 0 |
| Num_trans: | 9 |
| All_trans: | ENSMUST00000141730.7:0 ENSMUST00000100305.7:0 AB093209:0 ENSMUST00000075012.7:1 NM_198298:1 uc007mau.1:1 uc007mav.1:1 BC076626:1 ENSMUST00000106746.7:9 |
TATA-Box annotation
| Distance to TSS: | -18 |
|---|---|
| Nearest PromoterID: | NM_198298 |
| Entrez ID: | 78455 |
| Nearest Unigene: | Mm.272047 |
| Nearest Refseq: | NM_198298 |
| Nearest Ensembl: | ENSMUSG00000020721 |
| Gene Name: | helicase with zinc finger domain |
| Gene Alias: | 3110078M01Rik |
| Gene Description: | helicase with zinc finger domain |
| Gene Type: | protein-coding |
| CpG%: | 0.07 |
| GC%: | 0.621891 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-43(CACTTTAAAGGC,-,0.00)" |
