Difference between revisions of "TSS:Mm 99802.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000141271.1:-1 uc007mba.1:-1 AK048292:-1 |chr=chr11 |cpg_percent=0.095 |distance=-1 |distance_to_tss=592 |end=107793877 |entrez_id=54377 |gc_pe...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |AW491861= | ||
|all_trans=ENSMUST00000141271.1:-1 uc007mba.1:-1 AK048292:-1 | |all_trans=ENSMUST00000141271.1:-1 uc007mba.1:-1 AK048292:-1 | ||
|chr=chr11 | |chr=chr11 | ||
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|distance_to_tss=592 | |distance_to_tss=592 | ||
|end=107793877 | |end=107793877 | ||
| + | |end_of_center_position=107793872 | ||
|entrez_id=54377 | |entrez_id=54377 | ||
|gc_percent=0.721393 | |gc_percent=0.721393 | ||
| − | |gene_alias=AI413107 | + | |gene_alias=AI413107 |
|gene_description="calcium channel, voltage-dependent, gamma subunit 4" | |gene_description="calcium channel, voltage-dependent, gamma subunit 4" | ||
|gene_id= | |gene_id= | ||
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|species=mouse | |species=mouse | ||
|start=107793866 | |start=107793866 | ||
| + | |start_of_center_position=107793871 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000141271.1 uc007mba.1 AK048292 | |transcript_name=ENSMUST00000141271.1 uc007mba.1 AK048292 | ||
Revision as of 11:15, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 107793871 |
|---|---|
| End of the center position in the TSS region: | 107793872 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000141271.1 uc007mba.1 AK048292 |
|---|---|
| Distance: | -1 |
| Num_trans: | 3 |
| All_trans: | ENSMUST00000141271.1:-1 uc007mba.1:-1 AK048292:-1 |
TATA-Box annotation
| Distance to TSS: | 592 |
|---|---|
| Nearest PromoterID: | NM_019431 |
| Entrez ID: | 54377 |
| Nearest Unigene: | Mm.103724 |
| Nearest Refseq: | NM_019431 |
| Nearest Ensembl: | ENSMUSG00000020723 |
| Gene Name: | predicted gene 11650 |
| Gene Alias: | AI413107 |
| Gene Description: | "calcium channel, voltage-dependent, gamma subunit 4" |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.721393 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
