Difference between revisions of "TSS:Mm 99809.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000152958.7:-36 ENSMUST00000146050.1:-41 |chr=chr11 |cpg_percent=0.015 |distance=-36 |distance_to_tss=-14080 |end=108381229 |entrez_id=11818 |g...") |
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{{TSSDetail | {{TSSDetail | ||
|all_trans=ENSMUST00000152958.7:-36 ENSMUST00000146050.1:-41 | |all_trans=ENSMUST00000152958.7:-36 ENSMUST00000146050.1:-41 | ||
| + | |beta-2-GPI= | ||
| + | |beta2-GPI= | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=-14080 | |distance_to_tss=-14080 | ||
|end=108381229 | |end=108381229 | ||
| + | |end_of_center_position=108381217 | ||
|entrez_id=11818 | |entrez_id=11818 | ||
|gc_percent=0.507463 | |gc_percent=0.507463 | ||
| − | |gene_alias=B2GPI | + | |gene_alias=B2GPI |
|gene_description=apolipoprotein H | |gene_description=apolipoprotein H | ||
|gene_id=11818 | |gene_id=11818 | ||
| Line 24: | Line 27: | ||
|species=mouse | |species=mouse | ||
|start=108381204 | |start=108381204 | ||
| + | |start_of_center_position=108381216 | ||
|strand=+ | |strand=+ | ||
|tata_box="-69(CCTTTTAGGAGG,+,0.00)" | |tata_box="-69(CCTTTTAGGAGG,+,0.00)" | ||
Revision as of 11:18, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 108381216 |
|---|---|
| End of the center position in the TSS region: | 108381217 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000152958.7 |
|---|---|
| Distance: | -36 |
| Num_trans: | 2 |
| All_trans: | ENSMUST00000152958.7:-36 ENSMUST00000146050.1:-41 |
TATA-Box annotation
| Distance to TSS: | -14080 |
|---|---|
| Nearest PromoterID: | NM_013475 |
| Entrez ID: | 11818 |
| Nearest Unigene: | Mm.2266 |
| Nearest Refseq: | NM_013475 |
| Nearest Ensembl: | ENSMUSG00000000049 |
| Gene Name: | apolipoprotein H |
| Gene Alias: | B2GPI |
| Gene Description: | apolipoprotein H |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.507463 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-69(CCTTTTAGGAGG,+,0.00)" |
