Difference between revisions of "TSS:Mm 99826.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AF073788:-16 AK049192:-93 BC057338:-134 ENSMUST00000052915.13:-151 NM_015732:-151 uc007mbu.2:-151 AK142333:-151 ENSMUST00000140821.1:290 |chr=chr11 |cpg...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |Axil= | ||
| + | |Conductin= | ||
|all_trans=AF073788:-16 AK049192:-93 BC057338:-134 ENSMUST00000052915.13:-151 NM_015732:-151 uc007mbu.2:-151 AK142333:-151 ENSMUST00000140821.1:290 | |all_trans=AF073788:-16 AK049192:-93 BC057338:-134 ENSMUST00000052915.13:-151 NM_015732:-151 uc007mbu.2:-151 AK142333:-151 ENSMUST00000140821.1:290 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=156 | |distance_to_tss=156 | ||
|end=108920510 | |end=108920510 | ||
| + | |end_of_center_position=108920505 | ||
|entrez_id=12006 | |entrez_id=12006 | ||
|gc_percent=0.59204 | |gc_percent=0.59204 | ||
| − | |gene_alias=Axi1 | + | |gene_alias=Axi1 |
|gene_description=axin 2 | |gene_description=axin 2 | ||
|gene_id=12006 | |gene_id=12006 | ||
| Line 24: | Line 27: | ||
|species=mouse | |species=mouse | ||
|start=108920499 | |start=108920499 | ||
| + | |start_of_center_position=108920504 | ||
|strand=+ | |strand=+ | ||
|transcript_name=AF073788 | |transcript_name=AF073788 | ||
Revision as of 11:20, 12 May 2019
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 108920504 |
|---|---|
| End of the center position in the TSS region: | 108920505 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AF073788 |
|---|---|
| Distance: | -16 |
| Num_trans: | 8 |
| All_trans: | AF073788:-16 AK049192:-93 BC057338:-134 ENSMUST00000052915.13:-151 NM_015732:-151 uc007mbu.2:-151 AK142333:-151 ENSMUST00000140821.1:290 |
TATA-Box annotation
| Distance to TSS: | 156 |
|---|---|
| Nearest PromoterID: | NM_015732 |
| Entrez ID: | 12006 |
| Nearest Unigene: | Mm.71710 |
| Nearest Refseq: | NM_015732 |
| Nearest Ensembl: | ENSMUSG00000000142 |
| Gene Name: | axin 2 |
| Gene Alias: | Axi1 |
| Gene Description: | axin 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.59204 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
