Difference between revisions of "TSS:Mm 99840.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK005466:0 |chr=chr11 |cpg_percent=0.01 |distance=0 |distance_to_tss=-2578 |end=109344297 |entrez_id=67927 |gc_percent=0.517413 |gene_alias=- |gene_desc...") |
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|distance_to_tss=-2578 | |distance_to_tss=-2578 | ||
|end=109344297 | |end=109344297 | ||
| + | |end_of_center_position=109344290 | ||
|entrez_id=67927 | |entrez_id=67927 | ||
|gc_percent=0.517413 | |gc_percent=0.517413 | ||
| Line 24: | Line 25: | ||
|species=mouse | |species=mouse | ||
|start=109344281 | |start=109344281 | ||
| + | |start_of_center_position=109344289 | ||
|strand=+ | |strand=+ | ||
|tata_box="-37(GGATATAAAGGC,-,0.00)" | |tata_box="-37(GGATATAAAGGC,-,0.00)" | ||
Revision as of 11:22, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 109344289 |
|---|---|
| End of the center position in the TSS region: | 109344290 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK005466 |
|---|---|
| Distance: | 0 |
| Num_trans: | 1 |
| All_trans: | AK005466:0 |
TATA-Box annotation
| Distance to TSS: | -2578 |
|---|---|
| Nearest PromoterID: | NR_027883 |
| Entrez ID: | 67927 |
| Nearest Unigene: | Mm.394490 |
| Nearest Refseq: | NR_027883 |
| Nearest Ensembl: | ENSMUSG00000099630 |
| Gene Name: | RIKEN cDNA 1600015H23 gene |
| Gene Alias: | - |
| Gene Description: | RIKEN cDNA 1700096J18 gene |
| Gene Type: | ncRNA |
| CpG%: | 0.01 |
| GC%: | 0.517413 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-37(GGATATAAAGGC,-,0.00)" |
