Difference between revisions of "TSS:Mm 99874.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000055404.7:0 uc007mcf.1:0 AK027987:0 AK036894:0 |chr=chr11 |cpg_percent=0.025 |distance=0 |distance_to_tss=-12028 |end=109413927 |entrez_id=13...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |ESTM12= | ||
| + | |X83328= | ||
|all_trans=ENSMUST00000055404.7:0 uc007mcf.1:0 AK027987:0 AK036894:0 | |all_trans=ENSMUST00000055404.7:0 uc007mcf.1:0 AK027987:0 AK036894:0 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=-12028 | |distance_to_tss=-12028 | ||
|end=109413927 | |end=109413927 | ||
| + | |end_of_center_position=109413919 | ||
|entrez_id=13929 | |entrez_id=13929 | ||
|gc_percent=0.59204 | |gc_percent=0.59204 | ||
| − | |gene_alias=AA408420 | + | |gene_alias=AA408420 |
|gene_description=archaelysin family metallopeptidase 2 | |gene_description=archaelysin family metallopeptidase 2 | ||
|gene_id=320509 | |gene_id=320509 | ||
| Line 24: | Line 27: | ||
|species=mouse | |species=mouse | ||
|start=109413909 | |start=109413909 | ||
| + | |start_of_center_position=109413918 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000055404.7 uc007mcf.1 AK027987 AK036894 | |transcript_name=ENSMUST00000055404.7 uc007mcf.1 AK027987 AK036894 | ||
Revision as of 11:26, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 109413918 |
|---|---|
| End of the center position in the TSS region: | 109413919 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000055404.7 uc007mcf.1 AK027987 AK036894 |
|---|---|
| Distance: | 0 |
| Num_trans: | 4 |
| All_trans: | ENSMUST00000055404.7:0 uc007mcf.1:0 AK027987:0 AK036894:0 |
TATA-Box annotation
| Distance to TSS: | -12028 |
|---|---|
| Nearest PromoterID: | NM_025275 |
| Entrez ID: | 13929 |
| Nearest Unigene: | Mm.211850 |
| Nearest Refseq: | NM_025275 |
| Nearest Ensembl: | ENSMUSG00000020610 |
| Gene Name: | RIKEN cDNA 9930022D16 gene |
| Gene Alias: | AA408420 |
| Gene Description: | archaelysin family metallopeptidase 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.59204 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
