Difference between revisions of "TSS:Mm 99894.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000141559.1:169 AK033185:169 |chr=chr11 |cpg_percent=0.015 |distance=169 |distance_to_tss=-4749 |end=109616151 |entrez_id=52639 |gc_percent=0.4...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |AW411817= | ||
| + | |D11Ertd498e= | ||
|all_trans=ENSMUST00000141559.1:169 AK033185:169 | |all_trans=ENSMUST00000141559.1:169 AK033185:169 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=-4749 | |distance_to_tss=-4749 | ||
|end=109616151 | |end=109616151 | ||
| + | |end_of_center_position=109616138 | ||
|entrez_id=52639 | |entrez_id=52639 | ||
|gc_percent=0.447761 | |gc_percent=0.447761 | ||
| − | |gene_alias=4930533H01Rik | + | |gene_alias=4930533H01Rik |
|gene_description="WD repeat domain, phosphoinositide interacting 1" | |gene_description="WD repeat domain, phosphoinositide interacting 1" | ||
|gene_id=102631572 | |gene_id=102631572 | ||
| Line 24: | Line 27: | ||
|species=mouse | |species=mouse | ||
|start=109616124 | |start=109616124 | ||
| + | |start_of_center_position=109616137 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000141559.1 AK033185 | |transcript_name=ENSMUST00000141559.1 AK033185 | ||
Revision as of 11:30, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 109616137 |
|---|---|
| End of the center position in the TSS region: | 109616138 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000141559.1 AK033185 |
|---|---|
| Distance: | 169 |
| Num_trans: | 2 |
| All_trans: | ENSMUST00000141559.1:169 AK033185:169 |
TATA-Box annotation
| Distance to TSS: | -4749 |
|---|---|
| Nearest PromoterID: | NM_145940 |
| Entrez ID: | 52639 |
| Nearest Unigene: | Mm.35817 |
| Nearest Refseq: | NM_145940 |
| Nearest Ensembl: | ENSMUSG00000041895 |
| Gene Name: | "predicted gene 11685; predicted gene, 29875" |
| Gene Alias: | 4930533H01Rik |
| Gene Description: | "WD repeat domain, phosphoinositide interacting 1" |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.447761 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
