Personal tools

Difference between revisions of "TSS:Mm 99912.1"

From referenceTSS

Jump to: navigation, search
(Created page with "{{TSSDetail |all_trans=ENSMUST00000149226.1:0 |chr=chr11 |cpg_percent=0.04 |distance=0 |distance_to_tss=59503 |end=109936318 |entrez_id=27404 |gc_percent=0.477612 |gene_alias=...")
 
Line 6: Line 6:
 
|distance_to_tss=59503
 
|distance_to_tss=59503
 
|end=109936318
 
|end=109936318
 +
|end_of_center_position=109936313
 
|entrez_id=27404
 
|entrez_id=27404
 
|gc_percent=0.477612
 
|gc_percent=0.477612
Line 24: Line 25:
 
|species=mouse
 
|species=mouse
 
|start=109936307
 
|start=109936307
 +
|start_of_center_position=109936312
 
|strand=+
 
|strand=+
 
|transcript_name=ENSMUST00000149226.1
 
|transcript_name=ENSMUST00000149226.1

Revision as of 11:33, 12 May 2019

Basic information about the TSS


TSS ID:mm_99912.1
Species:mouse
Chr:chr11
TSS Classification:no
Start:109936307
End:109936318
Strand:+
TSS Score:1
Start of the center position in the TSS region:109936312
End of the center position in the TSS region:109936313



Gene and protein annotation


Transcript_name:ENSMUST00000149226.1
Distance:0
GeneID:
HGNC/MGI_ID:MGI:3650098
UniProt_ID:
Gene_name:predicted gene 11697
Gene_symbol:Gm11697
Gene_synonyms:
Gene_source:MGI:3650098



Transcript annotation


Transcript_name:ENSMUST00000149226.1
Distance:0
Num_trans:1
All_trans:ENSMUST00000149226.1:0



TATA-Box annotation


Distance to TSS:59503
Nearest PromoterID:NM_013851
Entrez ID:27404
Nearest Unigene:Mm.341004
Nearest Refseq:NM_013851
Nearest Ensembl:ENSMUSG00000020620
Gene Name:predicted gene 11697
Gene Alias:Abca8
Gene Description:"ATP-binding cassette, sub-family A (ABC1), member 8b"
Gene Type:protein-coding
CpG%:0.04
GC%:0.477612
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):