Difference between revisions of "TSS:Mm 168320.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK002659:11 ENSMUST00000077915.9:-17 NM_001048057:-22 NM_023372:-22 uc007mfk.1:-22 uc007mfl.1:-22 AK010518:24 AK012391:24 BC055346:24 BC034339:37 AK0102...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |Rbt= | ||
| + | |Ts= | ||
| + | |Tss= | ||
|all_trans=AK002659:11 ENSMUST00000077915.9:-17 NM_001048057:-22 NM_023372:-22 uc007mfk.1:-22 uc007mfl.1:-22 AK010518:24 AK012391:24 BC055346:24 BC034339:37 AK010277:40 AK151517:40 ENSMUST00000106602.9:-41 AB037665:-41 ENSMUST00000106599.7:42 BC047046:50 ENSMUST00000082092.4:59 NM_001048058:214 BC094258:214 BC094644:214 BC081447:230 | |all_trans=AK002659:11 ENSMUST00000077915.9:-17 NM_001048057:-22 NM_023372:-22 uc007mfk.1:-22 uc007mfl.1:-22 AK010518:24 AK012391:24 BC055346:24 BC034339:37 AK010277:40 AK151517:40 ENSMUST00000106602.9:-41 AB037665:-41 ENSMUST00000106599.7:42 BC047046:50 ENSMUST00000082092.4:59 NM_001048058:214 BC094258:214 BC094644:214 BC081447:230 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 9: | ||
|distance_to_tss=23 | |distance_to_tss=23 | ||
|end=114668567 | |end=114668567 | ||
| + | |end_of_center_position=114668566 | ||
|entrez_id=67671 | |entrez_id=67671 | ||
|gc_percent=0.587065 | |gc_percent=0.587065 | ||
| − | |gene_alias=0610025G13Rik | + | |gene_alias=0610025G13Rik |
|gene_description=ribosomal protein L38 | |gene_description=ribosomal protein L38 | ||
|gene_id=67671 | |gene_id=67671 | ||
| Line 24: | Line 28: | ||
|species=mouse | |species=mouse | ||
|start=114668564 | |start=114668564 | ||
| + | |start_of_center_position=114668565 | ||
|strand=+ | |strand=+ | ||
|transcript_name=AK002659 | |transcript_name=AK002659 | ||
Revision as of 11:44, 12 May 2019
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 114668565 |
|---|---|
| End of the center position in the TSS region: | 114668566 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK002659 |
|---|---|
| Distance: | 11 |
| Num_trans: | 21 |
| All_trans: | AK002659:11 ENSMUST00000077915.9:-17 NM_001048057:-22 NM_023372:-22 uc007mfk.1:-22 uc007mfl.1:-22 AK010518:24 AK012391:24 BC055346:24 BC034339:37 AK010277:40 AK151517:40 ENSMUST00000106602.9:-41 AB037665:-41 ENSMUST00000106599.7:42 BC047046:50 ENSMUST00000082092.4:59 NM_001048058:214 BC094258:214 BC094644:214 BC081447:230 |
TATA-Box annotation
| Distance to TSS: | 23 |
|---|---|
| Nearest PromoterID: | NM_001048057 |
| Entrez ID: | 67671 |
| Nearest Unigene: | Mm.238817 |
| Nearest Refseq: | NM_023372 |
| Nearest Ensembl: | ENSMUSG00000057322 |
| Gene Name: | ribosomal protein L38 |
| Gene Alias: | 0610025G13Rik |
| Gene Description: | ribosomal protein L38 |
| Gene Type: | protein-coding |
| CpG%: | 0.075 |
| GC%: | 0.587065 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
