Difference between revisions of "TSS:Mm 99982.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=NM_001048058:7 BC094258:7 BC094644:7 BC081447:23 ENSMUST00000082092.4:-128 BC047046:-137 ENSMUST00000106599.7:-145 AK010277:-147 AK151517:-147 BC034339:...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |Rbt= | ||
| + | |Ts= | ||
| + | |Tss= | ||
|all_trans=NM_001048058:7 BC094258:7 BC094644:7 BC081447:23 ENSMUST00000082092.4:-128 BC047046:-137 ENSMUST00000106599.7:-145 AK010277:-147 AK151517:-147 BC034339:-150 AK010518:-163 AK012391:-163 BC055346:-163 AK002659:-176 ENSMUST00000077915.9:-206 NM_001048057:-211 NM_023372:-211 uc007mfk.1:-211 uc007mfl.1:-211 ENSMUST00000106602.9:-230 AB037665:-230 | |all_trans=NM_001048058:7 BC094258:7 BC094644:7 BC081447:23 ENSMUST00000082092.4:-128 BC047046:-137 ENSMUST00000106599.7:-145 AK010277:-147 AK151517:-147 BC034339:-150 AK010518:-163 AK012391:-163 BC055346:-163 AK002659:-176 ENSMUST00000077915.9:-206 NM_001048057:-211 NM_023372:-211 uc007mfk.1:-211 uc007mfl.1:-211 ENSMUST00000106602.9:-230 AB037665:-230 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 9: | ||
|distance_to_tss=-17 | |distance_to_tss=-17 | ||
|end=114668774 | |end=114668774 | ||
| + | |end_of_center_position=114668764 | ||
|entrez_id=67671 | |entrez_id=67671 | ||
|gc_percent=0.746269 | |gc_percent=0.746269 | ||
| − | |gene_alias=0610025G13Rik | + | |gene_alias=0610025G13Rik |
|gene_description=ribosomal protein L38 | |gene_description=ribosomal protein L38 | ||
|gene_id=67671 | |gene_id=67671 | ||
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|species=mouse | |species=mouse | ||
|start=114668753 | |start=114668753 | ||
| + | |start_of_center_position=114668763 | ||
|strand=+ | |strand=+ | ||
|transcript_name=NM_001048058 BC094258 BC094644 | |transcript_name=NM_001048058 BC094258 BC094644 | ||
Revision as of 11:45, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 114668763 |
|---|---|
| End of the center position in the TSS region: | 114668764 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | NM_001048058 BC094258 BC094644 |
|---|---|
| Distance: | 7 |
| Num_trans: | 21 |
| All_trans: | NM_001048058:7 BC094258:7 BC094644:7 BC081447:23 ENSMUST00000082092.4:-128 BC047046:-137 ENSMUST00000106599.7:-145 AK010277:-147 AK151517:-147 BC034339:-150 AK010518:-163 AK012391:-163 BC055346:-163 AK002659:-176 ENSMUST00000077915.9:-206 NM_001048057:-211 NM_023372:-211 uc007mfk.1:-211 uc007mfl.1:-211 ENSMUST00000106602.9:-230 AB037665:-230 |
TATA-Box annotation
| Distance to TSS: | -17 |
|---|---|
| Nearest PromoterID: | NM_001048058 |
| Entrez ID: | 67671 |
| Nearest Unigene: | Mm.238817 |
| Nearest Refseq: | NM_023372 |
| Nearest Ensembl: | ENSMUSG00000057322 |
| Gene Name: | ribosomal protein L38 |
| Gene Alias: | 0610025G13Rik |
| Gene Description: | ribosomal protein L38 |
| Gene Type: | protein-coding |
| CpG%: | 0.135 |
| GC%: | 0.746269 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
