Difference between revisions of "TSS:Mm 100004.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AY079516:-117 ENSMUST00000177952.7:-118 NM_001110338:-118 uc011yhg.1:-118 NM_001110337:-126 uc007mfw.2:-126 ENSMUST00000053361.11:176 AK128950:176 ENSMU...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |3200002M13Rik= | ||
| + | |Raig3= | ||
|all_trans=AY079516:-117 ENSMUST00000177952.7:-118 NM_001110338:-118 uc011yhg.1:-118 NM_001110337:-126 uc007mfw.2:-126 ENSMUST00000053361.11:176 AK128950:176 ENSMUST00000021071.13:184 ENSMUST00000136785.1:214 NM_147217:364 uc007mfx.2:364 BC031439:389 ENSMUST00000122967.2:-485 | |all_trans=AY079516:-117 ENSMUST00000177952.7:-118 NM_001110338:-118 uc011yhg.1:-118 NM_001110337:-126 uc007mfw.2:-126 ENSMUST00000053361.11:176 AK128950:176 ENSMUST00000021071.13:184 ENSMUST00000136785.1:214 NM_147217:364 uc007mfx.2:364 BC031439:389 ENSMUST00000122967.2:-485 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=122 | |distance_to_tss=122 | ||
|end=114851666 | |end=114851666 | ||
| + | |end_of_center_position=114851662 | ||
|entrez_id=70355 | |entrez_id=70355 | ||
|gc_percent=0.58209 | |gc_percent=0.58209 | ||
| − | |gene_alias=1110028I06Rik | + | |gene_alias=1110028I06Rik |
|gene_description="G protein-coupled receptor, family C, group 5, member C" | |gene_description="G protein-coupled receptor, family C, group 5, member C" | ||
|gene_id=70355 | |gene_id=70355 | ||
| Line 24: | Line 27: | ||
|species=mouse | |species=mouse | ||
|start=114851657 | |start=114851657 | ||
| + | |start_of_center_position=114851661 | ||
|strand=+ | |strand=+ | ||
|transcript_name=AY079516 | |transcript_name=AY079516 | ||
Revision as of 11:47, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 114851661 |
|---|---|
| End of the center position in the TSS region: | 114851662 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AY079516 |
|---|---|
| Distance: | -117 |
| Num_trans: | 14 |
| All_trans: | AY079516:-117 ENSMUST00000177952.7:-118 NM_001110338:-118 uc011yhg.1:-118 NM_001110337:-126 uc007mfw.2:-126 ENSMUST00000053361.11:176 AK128950:176 ENSMUST00000021071.13:184 ENSMUST00000136785.1:214 NM_147217:364 uc007mfx.2:364 BC031439:389 ENSMUST00000122967.2:-485 |
TATA-Box annotation
| Distance to TSS: | 122 |
|---|---|
| Nearest PromoterID: | NM_001110338 |
| Entrez ID: | 70355 |
| Nearest Unigene: | Mm.242413 |
| Nearest Refseq: | NM_147217 |
| Nearest Ensembl: | ENSMUSG00000051043 |
| Gene Name: | "G protein-coupled receptor, family C, group 5, member C" |
| Gene Alias: | 1110028I06Rik |
| Gene Description: | "G protein-coupled receptor, family C, group 5, member C" |
| Gene Type: | protein-coding |
| CpG%: | 0.06 |
| GC%: | 0.58209 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
