Difference between revisions of "TSS:Mm 100043.1"
From referenceTSS
(Created page with "{{TSSDetail |chr=chr11 |cpg_percent=0.02 |distance= |distance_to_tss=-53 |end=115134049 |entrez_id=246746 |gc_percent=0.507463 |gene_alias=CLIM1|CLM-1|CLM1|Digr2|F730004D16Rik...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |CLM-1= | ||
| + | |CLM1= | ||
| + | |Digr2= | ||
| + | |F730004D16Rik= | ||
| + | |IREM1= | ||
| + | |IgSF13= | ||
| + | |LMIR3= | ||
| + | |Pigr3= | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| Line 5: | Line 13: | ||
|distance_to_tss=-53 | |distance_to_tss=-53 | ||
|end=115134049 | |end=115134049 | ||
| + | |end_of_center_position=115134045 | ||
|entrez_id=246746 | |entrez_id=246746 | ||
|gc_percent=0.507463 | |gc_percent=0.507463 | ||
| − | |gene_alias=CLIM1 | + | |gene_alias=CLIM1 |
|gene_description=CD300 molecule like family member F | |gene_description=CD300 molecule like family member F | ||
|gene_name=Cd300lf | |gene_name=Cd300lf | ||
| Line 18: | Line 27: | ||
|species=mouse | |species=mouse | ||
|start=115134040 | |start=115134040 | ||
| + | |start_of_center_position=115134044 | ||
|strand=+ | |strand=+ | ||
|tata_box="-33(GCATATAAAGCA,+,0.00)" | |tata_box="-33(GCATATAAAGCA,+,0.00)" | ||
Revision as of 11:54, 12 May 2019
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 115134044 |
|---|---|
| End of the center position in the TSS region: | 115134045 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -53 |
|---|---|
| Nearest PromoterID: | NM_145634 |
| Entrez ID: | 246746 |
| Nearest Unigene: | Mm.277387 |
| Nearest Refseq: | NM_145634 |
| Nearest Ensembl: | ENSMUSG00000047798 |
| Gene Name: | Cd300lf |
| Gene Alias: | CLIM1 |
| Gene Description: | CD300 molecule like family member F |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.507463 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-33(GCATATAAAGCA,+,0.00)" |
