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Difference between revisions of "TSS:Mm 100052.1"

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(Created page with "{{TSSDetail |all_trans=AK040371:353 AK179531:425 |chr=chr11 |cpg_percent=0.025 |distance=353 |distance_to_tss=7282 |end=115180040 |entrez_id=66176 |gc_percent=0.60199 |gene_al...")
 
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|distance_to_tss=7282
 
|distance_to_tss=7282
 
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|end=115180040
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|end_of_center_position=115180034
 
|entrez_id=66176
 
|entrez_id=66176
 
|gc_percent=0.60199
 
|gc_percent=0.60199
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|species=mouse
 
|species=mouse
 
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|start_of_center_position=115180033
 
|strand=+
 
|strand=+
 
|transcript_name=AK040371
 
|transcript_name=AK040371

Revision as of 11:55, 12 May 2019

Basic information about the TSS


TSS ID:mm_100052.1
Species:mouse
Chr:chr11
TSS Classification:no
Start:115180027
End:115180040
Strand:+
TSS Score:1
Start of the center position in the TSS region:115180033
End of the center position in the TSS region:115180034



Gene and protein annotation


Transcript_name:AK040371
Distance:353
GeneID:26941
HGNC/MGI_ID:MGI:1349482
UniProt_ID:
Gene_name:"solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1"
Gene_symbol:Slc9a3r1
Gene_synonyms:EBP-50 NHE-RF NHERF1 sodium-hydrogen_exchanger_regulatory_factor
Gene_source:MGI:1349482



Transcript annotation


Transcript_name:AK040371
Distance:353
Num_trans:2
All_trans:AK040371:353 AK179531:425



TATA-Box annotation


Distance to TSS:7282
Nearest PromoterID:NM_025400
Entrez ID:66176
Nearest Unigene:Mm.86823
Nearest Refseq:NM_025400
Nearest Ensembl:ENSMUSG00000015542
Gene Name:"solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1"
Gene Alias:1110028N05Rik
Gene Description:"N-acetyltransferase 9 (GCN5-related, putative)"
Gene Type:protein-coding
CpG%:0.025
GC%:0.60199
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):