Difference between revisions of "TSS:Mm 163270.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=BC140976:-2 ENSMUST00000156230.1:-18 AK049868:-18 AK167098:-37 AK171457:-42 AK040894:-44 AK155041:-57 ENSMUST00000135536.7:-58 AK171314:-58 AK131112:-59...") |
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| Line 6: | Line 6: | ||
|distance_to_tss=83 | |distance_to_tss=83 | ||
|end=115187571 | |end=115187571 | ||
| + | |end_of_center_position=115187570 | ||
|entrez_id=320534 | |entrez_id=320534 | ||
|gc_percent=0.666667 | |gc_percent=0.666667 | ||
| − | |gene_alias=C630005D06Rik | + | |gene_alias=C630005D06Rik |
|gene_description=transmembrane protein 104 | |gene_description=transmembrane protein 104 | ||
|gene_id=320534 | |gene_id=320534 | ||
| Line 17: | Line 18: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=MGI:2444222 | |hgnc_mgi_id=MGI:2444222 | ||
| + | |mFLJ00021= | ||
|nearest_ensembl=ENSMUSG00000045980 | |nearest_ensembl=ENSMUSG00000045980 | ||
|nearest_promoter_id=NM_001033393 | |nearest_promoter_id=NM_001033393 | ||
| Line 24: | Line 26: | ||
|species=mouse | |species=mouse | ||
|start=115187568 | |start=115187568 | ||
| + | |start_of_center_position=115187569 | ||
|strand=+ | |strand=+ | ||
|transcript_name=BC140976 | |transcript_name=BC140976 | ||
Revision as of 11:55, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 115187569 |
|---|---|
| End of the center position in the TSS region: | 115187570 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | BC140976 |
|---|---|
| Distance: | -2 |
| Num_trans: | 18 |
| All_trans: | BC140976:-2 ENSMUST00000156230.1:-18 AK049868:-18 AK167098:-37 AK171457:-42 AK040894:-44 AK155041:-57 ENSMUST00000135536.7:-58 AK171314:-58 AK131112:-59 ENSMUST00000100235.8:-82 ENSMUST00000061450.6:-82 NM_001033393:-82 uc007mgt.2:-82 uc007mgu.2:-82 uc007mgv.2:-82 uc011yhj.1:-82 uc007mgw.2:-82 |
TATA-Box annotation
| Distance to TSS: | 83 |
|---|---|
| Nearest PromoterID: | NM_001033393 |
| Entrez ID: | 320534 |
| Nearest Unigene: | Mm.260587 |
| Nearest Refseq: | NM_001033393 |
| Nearest Ensembl: | ENSMUSG00000045980 |
| Gene Name: | transmembrane protein 104 |
| Gene Alias: | C630005D06Rik |
| Gene Description: | transmembrane protein 104 |
| Gene Type: | protein-coding |
| CpG%: | 0.07 |
| GC%: | 0.666667 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
