Difference between revisions of "TSS:Mm 100073.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000093914.4:0 NM_001033775:0 uc007mho.1:0 AK133415:0 BC147608:-14 BC157912:-14 |chr=chr11 |cpg_percent=0.03 |distance=0 |distance_to_tss=2 |end...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |Trim47l= | ||
|all_trans=ENSMUST00000093914.4:0 NM_001033775:0 uc007mho.1:0 AK133415:0 BC147608:-14 BC157912:-14 | |all_trans=ENSMUST00000093914.4:0 NM_001033775:0 uc007mho.1:0 AK133415:0 BC147608:-14 BC157912:-14 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=2 | |distance_to_tss=2 | ||
|end=115440554 | |end=115440554 | ||
| + | |end_of_center_position=115440548 | ||
|entrez_id=432613 | |entrez_id=432613 | ||
|gc_percent=0.542289 | |gc_percent=0.542289 | ||
| − | |gene_alias=4933422H20Rik | + | |gene_alias=4933422H20Rik |
|gene_description=tripartite motif-containing 80 | |gene_description=tripartite motif-containing 80 | ||
|gene_id=432613 | |gene_id=432613 | ||
| Line 24: | Line 26: | ||
|species=mouse | |species=mouse | ||
|start=115440540 | |start=115440540 | ||
| + | |start_of_center_position=115440547 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000093914.4 NM_001033775 uc007mho.1 AK133415 | |transcript_name=ENSMUST00000093914.4 NM_001033775 uc007mho.1 AK133415 | ||
Revision as of 11:59, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 115440547 |
|---|---|
| End of the center position in the TSS region: | 115440548 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000093914.4 NM_001033775 uc007mho.1 AK133415 |
|---|---|
| Distance: | 0 |
| Num_trans: | 6 |
| All_trans: | ENSMUST00000093914.4:0 NM_001033775:0 uc007mho.1:0 AK133415:0 BC147608:-14 BC157912:-14 |
TATA-Box annotation
| Distance to TSS: | 2 |
|---|---|
| Nearest PromoterID: | NM_001033775 |
| Entrez ID: | 432613 |
| Nearest Unigene: | Mm.308822 |
| Nearest Refseq: | NM_001033775 |
| Nearest Ensembl: | ENSMUSG00000070332 |
| Gene Name: | tripartite motif-containing 80 |
| Gene Alias: | 4933422H20Rik |
| Gene Description: | tripartite motif-containing 80 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.542289 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
