Difference between revisions of "TSS:Mm 100086.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK042345:13 ENSMUST00000126533.1:-61 AK146249:-86 ENSMUST00000136985.7:-105 ENSMUST00000140181.1:125 NM_177778:-126 uc007mht.1:-126 BC023126:-126 ENSMUS...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |BC023126= | ||
|all_trans=AK042345:13 ENSMUST00000126533.1:-61 AK146249:-86 ENSMUST00000136985.7:-105 ENSMUST00000140181.1:125 NM_177778:-126 uc007mht.1:-126 BC023126:-126 ENSMUST00000035240.6:-136 | |all_trans=AK042345:13 ENSMUST00000126533.1:-61 AK146249:-86 ENSMUST00000136985.7:-105 ENSMUST00000140181.1:125 NM_177778:-126 uc007mht.1:-126 BC023126:-126 ENSMUST00000035240.6:-136 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=139 | |distance_to_tss=139 | ||
|end=115475829 | |end=115475829 | ||
| + | |end_of_center_position=115475816 | ||
|entrez_id=276905 | |entrez_id=276905 | ||
|gc_percent=0.616915 | |gc_percent=0.616915 | ||
| − | |gene_alias=A630084C13 | + | |gene_alias=A630084C13 |
|gene_description=armadillo repeat containing 7 | |gene_description=armadillo repeat containing 7 | ||
|gene_id=276905 | |gene_id=276905 | ||
| Line 24: | Line 26: | ||
|species=mouse | |species=mouse | ||
|start=115475802 | |start=115475802 | ||
| + | |start_of_center_position=115475815 | ||
|strand=+ | |strand=+ | ||
|transcript_name=AK042345 | |transcript_name=AK042345 | ||
Revision as of 12:00, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 115475815 |
|---|---|
| End of the center position in the TSS region: | 115475816 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK042345 |
|---|---|
| Distance: | 13 |
| Num_trans: | 9 |
| All_trans: | AK042345:13 ENSMUST00000126533.1:-61 AK146249:-86 ENSMUST00000136985.7:-105 ENSMUST00000140181.1:125 NM_177778:-126 uc007mht.1:-126 BC023126:-126 ENSMUST00000035240.6:-136 |
TATA-Box annotation
| Distance to TSS: | 139 |
|---|---|
| Nearest PromoterID: | NM_177778 |
| Entrez ID: | 276905 |
| Nearest Unigene: | Mm.38019 |
| Nearest Refseq: | NM_177778 |
| Nearest Ensembl: | ENSMUSG00000057219 |
| Gene Name: | armadillo repeat containing 7 |
| Gene Alias: | A630084C13 |
| Gene Description: | armadillo repeat containing 7 |
| Gene Type: | protein-coding |
| CpG%: | 0.06 |
| GC%: | 0.616915 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
