Difference between revisions of "TSS:Mm 100087.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000140181.1:-19 AK042345:-131 ENSMUST00000126533.1:-231 AK146249:-256 ENSMUST00000136985.7:-275 NM_177778:-296 uc007mht.1:-296 BC023126:-296 EN...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |BC023126= | ||
|all_trans=ENSMUST00000140181.1:-19 AK042345:-131 ENSMUST00000126533.1:-231 AK146249:-256 ENSMUST00000136985.7:-275 NM_177778:-296 uc007mht.1:-296 BC023126:-296 ENSMUST00000035240.6:-306 | |all_trans=ENSMUST00000140181.1:-19 AK042345:-131 ENSMUST00000126533.1:-231 AK146249:-256 ENSMUST00000136985.7:-275 NM_177778:-296 uc007mht.1:-296 BC023126:-296 ENSMUST00000035240.6:-306 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=297 | |distance_to_tss=297 | ||
|end=115475976 | |end=115475976 | ||
| + | |end_of_center_position=115475975 | ||
|entrez_id=276905 | |entrez_id=276905 | ||
|gc_percent=0.636816 | |gc_percent=0.636816 | ||
| − | |gene_alias=A630084C13 | + | |gene_alias=A630084C13 |
|gene_description=armadillo repeat containing 7 | |gene_description=armadillo repeat containing 7 | ||
|gene_id=276905 | |gene_id=276905 | ||
| Line 24: | Line 26: | ||
|species=mouse | |species=mouse | ||
|start=115475972 | |start=115475972 | ||
| + | |start_of_center_position=115475974 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000140181.1 | |transcript_name=ENSMUST00000140181.1 | ||
Revision as of 12:01, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 115475974 |
|---|---|
| End of the center position in the TSS region: | 115475975 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000140181.1 |
|---|---|
| Distance: | -19 |
| Num_trans: | 9 |
| All_trans: | ENSMUST00000140181.1:-19 AK042345:-131 ENSMUST00000126533.1:-231 AK146249:-256 ENSMUST00000136985.7:-275 NM_177778:-296 uc007mht.1:-296 BC023126:-296 ENSMUST00000035240.6:-306 |
TATA-Box annotation
| Distance to TSS: | 297 |
|---|---|
| Nearest PromoterID: | NM_177778 |
| Entrez ID: | 276905 |
| Nearest Unigene: | Mm.38019 |
| Nearest Refseq: | NM_177778 |
| Nearest Ensembl: | ENSMUSG00000057219 |
| Gene Name: | armadillo repeat containing 7 |
| Gene Alias: | A630084C13 |
| Gene Description: | armadillo repeat containing 7 |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.636816 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
