Difference between revisions of "TSS:Mm 100092.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000058109.8:0 AB341708:1 AK131937:171 NM_025305:182 uc007mia.1:182 AK012225:182 BC049636:182 AK162024:204 AK009251:218 |chr=chr11 |cpg_percent=...") |
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| Line 6: | Line 6: | ||
|distance_to_tss=-29 | |distance_to_tss=-29 | ||
|end=115603969 | |end=115603969 | ||
| + | |end_of_center_position=115603945 | ||
|entrez_id=260302 | |entrez_id=260302 | ||
|gc_percent=0.751244 | |gc_percent=0.751244 | ||
| − | |gene_alias=C230037M19Rik | + | |gene_alias=C230037M19Rik |
|gene_description="golgi associated, gamma adaptin ear containing, ARF binding protein 3" | |gene_description="golgi associated, gamma adaptin ear containing, ARF binding protein 3" | ||
|gene_id=50529 | |gene_id=50529 | ||
| Line 17: | Line 18: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=MGI:1354367 | |hgnc_mgi_id=MGI:1354367 | ||
| + | |mKIAA0154= | ||
|nearest_ensembl=ENSMUSG00000020740 | |nearest_ensembl=ENSMUSG00000020740 | ||
|nearest_promoter_id=NM_173048 | |nearest_promoter_id=NM_173048 | ||
| Line 24: | Line 26: | ||
|species=mouse | |species=mouse | ||
|start=115603920 | |start=115603920 | ||
| + | |start_of_center_position=115603944 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000058109.8 | |transcript_name=ENSMUST00000058109.8 | ||
Revision as of 12:02, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 115603944 |
|---|---|
| End of the center position in the TSS region: | 115603945 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000058109.8 |
|---|---|
| Distance: | 0 |
| Num_trans: | 9 |
| All_trans: | ENSMUST00000058109.8:0 AB341708:1 AK131937:171 NM_025305:182 uc007mia.1:182 AK012225:182 BC049636:182 AK162024:204 AK009251:218 |
TATA-Box annotation
| Distance to TSS: | -29 |
|---|---|
| Nearest PromoterID: | NM_173048 |
| Entrez ID: | 260302 |
| Nearest Unigene: | Mm.119479 |
| Nearest Refseq: | NM_173048 |
| Nearest Ensembl: | ENSMUSG00000020740 |
| Gene Name: | mitchondrial ribosomal protein S7 |
| Gene Alias: | C230037M19Rik |
| Gene Description: | "golgi associated, gamma adaptin ear containing, ARF binding protein 3" |
| Gene Type: | protein-coding |
| CpG%: | 0.14 |
| GC%: | 0.751244 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
