Difference between revisions of "TSS:Mm 100095.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK162024:0 AK009251:7 NM_025305:-19 uc007mia.1:-19 AK012225:-19 BC049636:-19 AK131937:-30 AB341708:-200 ENSMUST00000058109.8:-245 |chr=chr11 |cpg_percen...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |Rpms7= | ||
|all_trans=AK162024:0 AK009251:7 NM_025305:-19 uc007mia.1:-19 AK012225:-19 BC049636:-19 AK131937:-30 AB341708:-200 ENSMUST00000058109.8:-245 | |all_trans=AK162024:0 AK009251:7 NM_025305:-19 uc007mia.1:-19 AK012225:-19 BC049636:-19 AK131937:-30 AB341708:-200 ENSMUST00000058109.8:-245 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=24 | |distance_to_tss=24 | ||
|end=115604180 | |end=115604180 | ||
| + | |end_of_center_position=115604175 | ||
|entrez_id=50529 | |entrez_id=50529 | ||
|gc_percent=0.711443 | |gc_percent=0.711443 | ||
| − | |gene_alias=MRP-S7 | + | |gene_alias=MRP-S7 |
|gene_description=mitchondrial ribosomal protein S7 | |gene_description=mitchondrial ribosomal protein S7 | ||
|gene_id=50529 | |gene_id=50529 | ||
| Line 24: | Line 26: | ||
|species=mouse | |species=mouse | ||
|start=115604169 | |start=115604169 | ||
| + | |start_of_center_position=115604174 | ||
|strand=+ | |strand=+ | ||
|transcript_name=AK162024 | |transcript_name=AK162024 | ||
Revision as of 12:02, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 115604174 |
|---|---|
| End of the center position in the TSS region: | 115604175 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK162024 |
|---|---|
| Distance: | 0 |
| Num_trans: | 9 |
| All_trans: | AK162024:0 AK009251:7 NM_025305:-19 uc007mia.1:-19 AK012225:-19 BC049636:-19 AK131937:-30 AB341708:-200 ENSMUST00000058109.8:-245 |
TATA-Box annotation
| Distance to TSS: | 24 |
|---|---|
| Nearest PromoterID: | NM_025305 |
| Entrez ID: | 50529 |
| Nearest Unigene: | Mm.193040 |
| Nearest Refseq: | NM_025305 |
| Nearest Ensembl: | ENSMUSG00000046756 |
| Gene Name: | mitchondrial ribosomal protein S7 |
| Gene Alias: | MRP-S7 |
| Gene Description: | mitchondrial ribosomal protein S7 |
| Gene Type: | protein-coding |
| CpG%: | 0.11 |
| GC%: | 0.711443 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
