Difference between revisions of "TSS:Mm 100112.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000129765.7:0 ENSMUST00000141748.7:0 NM_029557:0 uc007mir.1:0 uc011yhp.1:0 AK002758:0 AK089005:0 ENSMUST00000021134.9:-9 ENSMUST00000106481.8:-...") |
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| Line 6: | Line 6: | ||
|distance_to_tss=16 | |distance_to_tss=16 | ||
|end=115814778 | |end=115814778 | ||
| + | |end_of_center_position=115814756 | ||
|entrez_id=76265 | |entrez_id=76265 | ||
|gc_percent=0.741294 | |gc_percent=0.741294 | ||
| Line 24: | Line 25: | ||
|species=mouse | |species=mouse | ||
|start=115814732 | |start=115814732 | ||
| + | |start_of_center_position=115814755 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000129765.7 ENSMUST00000141748.7 NM_029557 uc007mir.1 uc011yhp.1 AK002758 AK089005 | |transcript_name=ENSMUST00000129765.7 ENSMUST00000141748.7 NM_029557 uc007mir.1 uc011yhp.1 AK002758 AK089005 | ||
Revision as of 12:06, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 115814755 |
|---|---|
| End of the center position in the TSS region: | 115814756 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000129765.7 ENSMUST00000141748.7 NM_029557 uc007mir.1 uc011yhp.1 AK002758 AK089005 |
|---|---|
| Distance: | 0 |
| Num_trans: | 13 |
| All_trans: | ENSMUST00000129765.7:0 ENSMUST00000141748.7:0 NM_029557:0 uc007mir.1:0 uc011yhp.1:0 AK002758:0 AK089005:0 ENSMUST00000021134.9:-9 ENSMUST00000106481.8:-9 uc007miq.1:-23 BC117762:-23 BC126953:-23 ENSMUST00000128266.1:27 |
TATA-Box annotation
| Distance to TSS: | 16 |
|---|---|
| Nearest PromoterID: | NM_029557 |
| Entrez ID: | 76265 |
| Nearest Unigene: | Mm.275438 |
| Nearest Refseq: | NM_029557 |
| Nearest Ensembl: | ENSMUSG00000020781 |
| Gene Name: | tRNA splicing endonuclease subunit 54 |
| Gene Alias: | 0610034P02Rik |
| Gene Description: | tRNA splicing endonuclease subunit 54 |
| Gene Type: | protein-coding |
| CpG%: | 0.145 |
| GC%: | 0.741294 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
