Difference between revisions of "TSS:Mm 100120.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000152171.7:87 BC032884:87 NM_183259:260 uc007mja.2:260 uc007mjb.2:260 ENSMUST00000142089.1:299 AK020450:299 ENSMUST00000131566.1:323 AK004370:...") |
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|distance_to_tss=-277 | |distance_to_tss=-277 | ||
|end=115899879 | |end=115899879 | ||
| + | |end_of_center_position=115899862 | ||
|entrez_id=66528 | |entrez_id=66528 | ||
|gc_percent=0.616915 | |gc_percent=0.616915 | ||
| Line 24: | Line 25: | ||
|species=mouse | |species=mouse | ||
|start=115899844 | |start=115899844 | ||
| + | |start_of_center_position=115899861 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000152171.7 BC032884 | |transcript_name=ENSMUST00000152171.7 BC032884 | ||
Revision as of 12:06, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 115899861 |
|---|---|
| End of the center position in the TSS region: | 115899862 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000152171.7 BC032884 |
|---|---|
| Distance: | 87 |
| Num_trans: | 10 |
| All_trans: | ENSMUST00000152171.7:87 BC032884:87 NM_183259:260 uc007mja.2:260 uc007mjb.2:260 ENSMUST00000142089.1:299 AK020450:299 ENSMUST00000131566.1:323 AK004370:327 BC065414:429 |
TATA-Box annotation
| Distance to TSS: | -277 |
|---|---|
| Nearest PromoterID: | NM_183259 |
| Entrez ID: | 66528 |
| Nearest Unigene: | Mm.275740 |
| Nearest Refseq: | NM_183259 |
| Nearest Ensembl: | ENSMUSG00000048442 |
| Gene Name: | small integral membrane protein 5 |
| Gene Alias: | 2210020M01Rik |
| Gene Description: | small integral membrane protein 5 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.616915 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
