Difference between revisions of "TSS:Mm 100128.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000131737.7:0 NM_020483:0 uc007mjd.1:0 AK147869:0 AK012245:0 BC021757:0 X68061:0 ENSMUST00000021101.3:5 ENSMUST00000146209.7:-57 ENSMUST0000014...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |Hcngp= | ||
|all_trans=ENSMUST00000131737.7:0 NM_020483:0 uc007mjd.1:0 AK147869:0 AK012245:0 BC021757:0 X68061:0 ENSMUST00000021101.3:5 ENSMUST00000146209.7:-57 ENSMUST00000140991.1:-348 | |all_trans=ENSMUST00000131737.7:0 NM_020483:0 uc007mjd.1:0 AK147869:0 AK012245:0 BC021757:0 X68061:0 ENSMUST00000021101.3:5 ENSMUST00000146209.7:-57 ENSMUST00000140991.1:-348 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=-10 | |distance_to_tss=-10 | ||
|end=115933669 | |end=115933669 | ||
| + | |end_of_center_position=115933650 | ||
|entrez_id=57230 | |entrez_id=57230 | ||
|gc_percent=0.502488 | |gc_percent=0.502488 | ||
| − | |gene_alias=2700016D05Rik | + | |gene_alias=2700016D05Rik |
|gene_description=SAP30 binding protein | |gene_description=SAP30 binding protein | ||
|gene_id=102643099 57230 | |gene_id=102643099 57230 | ||
| Line 24: | Line 26: | ||
|species=mouse | |species=mouse | ||
|start=115933629 | |start=115933629 | ||
| + | |start_of_center_position=115933649 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000131737.7 NM_020483 uc007mjd.1 AK147869 AK012245 BC021757 X68061 | |transcript_name=ENSMUST00000131737.7 NM_020483 uc007mjd.1 AK147869 AK012245 BC021757 X68061 | ||
Revision as of 12:07, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 115933649 |
|---|---|
| End of the center position in the TSS region: | 115933650 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000131737.7 NM_020483 uc007mjd.1 AK147869 AK012245 BC021757 X68061 |
|---|---|
| Distance: | 0 |
| Num_trans: | 10 |
| All_trans: | ENSMUST00000131737.7:0 NM_020483:0 uc007mjd.1:0 AK147869:0 AK012245:0 BC021757:0 X68061:0 ENSMUST00000021101.3:5 ENSMUST00000146209.7:-57 ENSMUST00000140991.1:-348 |
TATA-Box annotation
| Distance to TSS: | -10 |
|---|---|
| Nearest PromoterID: | NM_020483 |
| Entrez ID: | 57230 |
| Nearest Unigene: | Mm.267810 |
| Nearest Refseq: | NM_020483 |
| Nearest Ensembl: | ENSMUSG00000020755 |
| Gene Name: | SAP30 binding protein |
| Gene Alias: | 2700016D05Rik |
| Gene Description: | SAP30 binding protein |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.502488 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
