Difference between revisions of "TSS:Mm 100129.1"
From referenceTSS
(Created page with "{{TSSDetail |chr=chr11 |cpg_percent=0.015 |distance= |distance_to_tss=-3471 |end=115971276 |entrez_id=192897 |gc_percent=0.522388 |gene_alias=AA407042|C230078O20|CD104 |gene_d...") |
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| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |C230078O20= | ||
| + | |CD104= | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| Line 5: | Line 7: | ||
|distance_to_tss=-3471 | |distance_to_tss=-3471 | ||
|end=115971276 | |end=115971276 | ||
| + | |end_of_center_position=115971255 | ||
|entrez_id=192897 | |entrez_id=192897 | ||
|gc_percent=0.522388 | |gc_percent=0.522388 | ||
| − | |gene_alias=AA407042 | + | |gene_alias=AA407042 |
|gene_description=integrin beta 4 | |gene_description=integrin beta 4 | ||
|gene_name=Itgb4 | |gene_name=Itgb4 | ||
| Line 18: | Line 21: | ||
|species=mouse | |species=mouse | ||
|start=115971232 | |start=115971232 | ||
| + | |start_of_center_position=115971254 | ||
|strand=+ | |strand=+ | ||
|transcript_name= | |transcript_name= | ||
Revision as of 12:07, 12 May 2019
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 115971254 |
|---|---|
| End of the center position in the TSS region: | 115971255 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -3471 |
|---|---|
| Nearest PromoterID: | NM_001005608 |
| Entrez ID: | 192897 |
| Nearest Unigene: | Mm.213873 |
| Nearest Refseq: | NM_133663 |
| Nearest Ensembl: | ENSMUSG00000020758 |
| Gene Name: | Itgb4 |
| Gene Alias: | AA407042 |
| Gene Description: | integrin beta 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.522388 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
