Difference between revisions of "TSS:Mm 100131.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000021107.13:132 L04678:132 ENSMUST00000169928.7:148 ENSMUST00000106461.7:148 NM_133663:148 NM_001005608:148 uc007mjf.1:148 uc007mjg.1:148 uc00...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |C230078O20= | ||
| + | |CD104= | ||
|all_trans=ENSMUST00000021107.13:132 L04678:132 ENSMUST00000169928.7:148 ENSMUST00000106461.7:148 NM_133663:148 NM_001005608:148 uc007mjf.1:148 uc007mjg.1:148 uc007mjh.1:148 uc007mji.1:148 AK147424:148 ENSMUST00000151691.7:266 AK048888:266 ENSMUST00000106460.8:402 AK142648:459 AK144947:485 | |all_trans=ENSMUST00000021107.13:132 L04678:132 ENSMUST00000169928.7:148 ENSMUST00000106461.7:148 NM_133663:148 NM_001005608:148 uc007mjf.1:148 uc007mjg.1:148 uc007mjh.1:148 uc007mji.1:148 AK147424:148 ENSMUST00000151691.7:266 AK048888:266 ENSMUST00000106460.8:402 AK142648:459 AK144947:485 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=-157 | |distance_to_tss=-157 | ||
|end=115974577 | |end=115974577 | ||
| + | |end_of_center_position=115974569 | ||
|entrez_id=192897 | |entrez_id=192897 | ||
|gc_percent=0.502488 | |gc_percent=0.502488 | ||
| − | |gene_alias=AA407042 | + | |gene_alias=AA407042 |
|gene_description=integrin beta 4 | |gene_description=integrin beta 4 | ||
|gene_id=192897 | |gene_id=192897 | ||
| Line 24: | Line 27: | ||
|species=mouse | |species=mouse | ||
|start=115974559 | |start=115974559 | ||
| + | |start_of_center_position=115974568 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000021107.13 L04678 | |transcript_name=ENSMUST00000021107.13 L04678 | ||
Revision as of 12:07, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 115974568 |
|---|---|
| End of the center position in the TSS region: | 115974569 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENSMUST00000021107.13 L04678 |
|---|---|
| Distance: | 132 |
| Num_trans: | 16 |
| All_trans: | ENSMUST00000021107.13:132 L04678:132 ENSMUST00000169928.7:148 ENSMUST00000106461.7:148 NM_133663:148 NM_001005608:148 uc007mjf.1:148 uc007mjg.1:148 uc007mjh.1:148 uc007mji.1:148 AK147424:148 ENSMUST00000151691.7:266 AK048888:266 ENSMUST00000106460.8:402 AK142648:459 AK144947:485 |
TATA-Box annotation
| Distance to TSS: | -157 |
|---|---|
| Nearest PromoterID: | NM_001005608 |
| Entrez ID: | 192897 |
| Nearest Unigene: | Mm.213873 |
| Nearest Refseq: | NM_133663 |
| Nearest Ensembl: | ENSMUSG00000020758 |
| Gene Name: | integrin beta 4 |
| Gene Alias: | AA407042 |
| Gene Description: | integrin beta 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.502488 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
