Difference between revisions of "TSS:Mm 100145.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK144111:-116 ENSMUST00000130286.1:-172 uc007mjl.1:-201 AK145317:-201 |chr=chr11 |cpg_percent=0.02 |distance=-116 |distance_to_tss=18383 |end=115993112...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |C230078O20= | ||
| + | |CD104= | ||
|all_trans=AK144111:-116 ENSMUST00000130286.1:-172 uc007mjl.1:-201 AK145317:-201 | |all_trans=AK144111:-116 ENSMUST00000130286.1:-172 uc007mjl.1:-201 AK145317:-201 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=18383 | |distance_to_tss=18383 | ||
|end=115993112 | |end=115993112 | ||
| + | |end_of_center_position=115993108 | ||
|entrez_id=192897 | |entrez_id=192897 | ||
|gc_percent=0.597015 | |gc_percent=0.597015 | ||
| − | |gene_alias=AA407042 | + | |gene_alias=AA407042 |
|gene_description=integrin beta 4 | |gene_description=integrin beta 4 | ||
|gene_id=192897 | |gene_id=192897 | ||
| Line 24: | Line 27: | ||
|species=mouse | |species=mouse | ||
|start=115993103 | |start=115993103 | ||
| + | |start_of_center_position=115993107 | ||
|strand=+ | |strand=+ | ||
|transcript_name=AK144111 | |transcript_name=AK144111 | ||
Revision as of 12:08, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 115993107 |
|---|---|
| End of the center position in the TSS region: | 115993108 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK144111 |
|---|---|
| Distance: | -116 |
| Num_trans: | 4 |
| All_trans: | AK144111:-116 ENSMUST00000130286.1:-172 uc007mjl.1:-201 AK145317:-201 |
TATA-Box annotation
| Distance to TSS: | 18383 |
|---|---|
| Nearest PromoterID: | NM_133663 |
| Entrez ID: | 192897 |
| Nearest Unigene: | Mm.213873 |
| Nearest Refseq: | NM_133663 |
| Nearest Ensembl: | ENSMUSG00000020758 |
| Gene Name: | integrin beta 4 |
| Gene Alias: | AA407042 |
| Gene Description: | integrin beta 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.597015 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
