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Difference between revisions of "TSS:Mm 100148.1"

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(Created page with "{{TSSDetail |all_trans=ENSMUST00000021116.11:0 ENSMUST00000106452.1:0 ENSMUST00000176788.1:0 NM_172569:0 NM_001286006:0 uc007mjq.2:0 uc007mjp.2:0 AK077635:0 AK046395:0 AK07809...")
 
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{{TSSDetail
 
{{TSSDetail
 +
|Zc3h5=
 +
|Zc3hdc5=
 
|all_trans=ENSMUST00000021116.11:0 ENSMUST00000106452.1:0 ENSMUST00000176788.1:0 NM_172569:0 NM_001286006:0 uc007mjq.2:0 uc007mjp.2:0 AK077635:0 AK046395:0 AK078095:0 AK129438:0 AK134361:0 BC054452:0
 
|all_trans=ENSMUST00000021116.11:0 ENSMUST00000106452.1:0 ENSMUST00000176788.1:0 NM_172569:0 NM_001286006:0 uc007mjq.2:0 uc007mjp.2:0 AK077635:0 AK046395:0 AK078095:0 AK129438:0 AK134361:0 BC054452:0
 
|chr=chr11
 
|chr=chr11
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|distance_to_tss=29
 
|distance_to_tss=29
 
|end=116030385
 
|end=116030385
 +
|end_of_center_position=116030345
 
|entrez_id=217331
 
|entrez_id=217331
 
|gc_percent=0.681592
 
|gc_percent=0.681592
−
|gene_alias=B230379M23Rik|Zc3h5|Zc3hdc5|mKIAA1753
+
|gene_alias=B230379M23Rik
 
|gene_description=unkempt family zinc finger
 
|gene_description=unkempt family zinc finger
 
|gene_id=217331
 
|gene_id=217331
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|gene_type=protein-coding
 
|gene_type=protein-coding
 
|hgnc_mgi_id=MGI:2442456
 
|hgnc_mgi_id=MGI:2442456
 +
|mKIAA1753=
 
|nearest_ensembl=ENSMUSG00000020770
 
|nearest_ensembl=ENSMUSG00000020770
 
|nearest_promoter_id=NM_172569
 
|nearest_promoter_id=NM_172569
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|species=mouse
 
|species=mouse
 
|start=116030304
 
|start=116030304
 +
|start_of_center_position=116030344
 
|strand=+
 
|strand=+
 
|transcript_name=ENSMUST00000021116.11 ENSMUST00000106452.1 ENSMUST00000176788.1 NM_172569 NM_001286006 uc007mjq.2 uc007mjp.2 AK077635 AK046395 AK078095 AK129438 AK134361 BC054452
 
|transcript_name=ENSMUST00000021116.11 ENSMUST00000106452.1 ENSMUST00000176788.1 NM_172569 NM_001286006 uc007mjq.2 uc007mjp.2 AK077635 AK046395 AK078095 AK129438 AK134361 BC054452

Revision as of 12:10, 12 May 2019

Basic information about the TSS

TSS ID:mm_100148.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:116030304
End:116030385
Strand:+
TSS Score:1
Start of the center position in the TSS region:116030344
End of the center position in the TSS region:116030345



Gene and protein annotation

Transcript_name:ENSMUST00000021116.11 ENSMUST00000106452.1 ENSMUST00000176788.1 NM_172569 NM_001286006 uc007mjq.2 uc007mjp.2 AK077635 AK046395 AK078095 AK129438 AK134361 BC054452
Distance:0
GeneID:217331
HGNC/MGI_ID:MGI:2442456
UniProt_ID:Q3UYU7 Q3V2Z5 Q8BL48
Gene_name:unkempt family zinc finger
Gene_symbol:Unk
Gene_synonyms:B230379M23Rik Zc3h5
Gene_source:MGI:2442456



Transcript annotation

Transcript_name:ENSMUST00000021116.11 ENSMUST00000106452.1 ENSMUST00000176788.1 NM_172569 NM_001286006 uc007mjq.2 uc007mjp.2 AK077635 AK046395 AK078095 AK129438 AK134361 BC054452
Distance:0
Num_trans:13
All_trans:ENSMUST00000021116.11:0 ENSMUST00000106452.1:0 ENSMUST00000176788.1:0 NM_172569:0 NM_001286006:0 uc007mjq.2:0 uc007mjp.2:0 AK077635:0 AK046395:0 AK078095:0 AK129438:0 AK134361:0 BC054452:0



TATA-Box annotation

Distance to TSS:29
Nearest PromoterID:NM_172569
Entrez ID:217331
Nearest Unigene:Mm.297706
Nearest Refseq:NM_172569
Nearest Ensembl:ENSMUSG00000020770
Gene Name:unkempt family zinc finger
Gene Alias:B230379M23Rik
Gene Description:unkempt family zinc finger
Gene Type:protein-coding
CpG%:0.115
GC%:0.681592
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):
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