Difference between revisions of "TSS:Mm 100149.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=BC054452:-287 AK134361:-314 AK129438:-328 AK078095:-340 ENSMUST00000176788.1:-343 ENSMUST00000021116.11:-344 ENSMUST00000106452.1:-344 AK046395:-344 NM_...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |Zc3h5= | ||
| + | |Zc3hdc5= | ||
|all_trans=BC054452:-287 AK134361:-314 AK129438:-328 AK078095:-340 ENSMUST00000176788.1:-343 ENSMUST00000021116.11:-344 ENSMUST00000106452.1:-344 AK046395:-344 NM_172569:-350 NM_001286006:-350 uc007mjq.2:-350 uc007mjp.2:-350 AK077635:-350 | |all_trans=BC054452:-287 AK134361:-314 AK129438:-328 AK078095:-340 ENSMUST00000176788.1:-343 ENSMUST00000021116.11:-344 ENSMUST00000106452.1:-344 AK046395:-344 NM_172569:-350 NM_001286006:-350 uc007mjq.2:-350 uc007mjp.2:-350 AK077635:-350 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=366 | |distance_to_tss=366 | ||
|end=116030698 | |end=116030698 | ||
| + | |end_of_center_position=116030682 | ||
|entrez_id=217331 | |entrez_id=217331 | ||
|gc_percent=0.641791 | |gc_percent=0.641791 | ||
| − | |gene_alias=B230379M23Rik | + | |gene_alias=B230379M23Rik |
|gene_description=unkempt family zinc finger | |gene_description=unkempt family zinc finger | ||
|gene_id=217331 | |gene_id=217331 | ||
| Line 17: | Line 20: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=MGI:2442456 | |hgnc_mgi_id=MGI:2442456 | ||
| + | |mKIAA1753= | ||
|nearest_ensembl=ENSMUSG00000020770 | |nearest_ensembl=ENSMUSG00000020770 | ||
|nearest_promoter_id=NM_172569 | |nearest_promoter_id=NM_172569 | ||
| Line 24: | Line 28: | ||
|species=mouse | |species=mouse | ||
|start=116030665 | |start=116030665 | ||
| + | |start_of_center_position=116030681 | ||
|strand=+ | |strand=+ | ||
|transcript_name=BC054452 | |transcript_name=BC054452 | ||
Revision as of 12:10, 12 May 2019
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 116030681 |
|---|---|
| End of the center position in the TSS region: | 116030682 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BC054452 |
|---|---|
| Distance: | -287 |
| Num_trans: | 13 |
| All_trans: | BC054452:-287 AK134361:-314 AK129438:-328 AK078095:-340 ENSMUST00000176788.1:-343 ENSMUST00000021116.11:-344 ENSMUST00000106452.1:-344 AK046395:-344 NM_172569:-350 NM_001286006:-350 uc007mjq.2:-350 uc007mjp.2:-350 AK077635:-350 |
TATA-Box annotation
| Distance to TSS: | 366 |
|---|---|
| Nearest PromoterID: | NM_172569 |
| Entrez ID: | 217331 |
| Nearest Unigene: | Mm.297706 |
| Nearest Refseq: | NM_172569 |
| Nearest Ensembl: | ENSMUSG00000020770 |
| Gene Name: | unkempt family zinc finger |
| Gene Alias: | B230379M23Rik |
| Gene Description: | unkempt family zinc finger |
| Gene Type: | protein-coding |
| CpG%: | 0.065 |
| GC%: | 0.641791 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
