Personal tools

Difference between revisions of "TSS:Mm 100153.1"

From referenceTSS

Jump to: navigation, search
(Created page with "{{TSSDetail |chr=chr11 |cpg_percent=0.105 |distance= |distance_to_tss=-103 |end=116110349 |entrez_id=217333 |gc_percent=0.771144 |gene_alias=2210023F24Rik |gene_description=tr...")
 
Line 5: Line 5:
 
|distance_to_tss=-103
 
|distance_to_tss=-103
 
|end=116110349
 
|end=116110349
 +
|end_of_center_position=116110339
 
|entrez_id=217333
 
|entrez_id=217333
 
|gc_percent=0.771144
 
|gc_percent=0.771144
Line 18: Line 19:
 
|species=mouse
 
|species=mouse
 
|start=116110327
 
|start=116110327
 +
|start_of_center_position=116110338
 
|strand=+
 
|strand=+
 
|transcript_name=
 
|transcript_name=

Revision as of 12:12, 12 May 2019

Basic information about the TSS


TSS ID:mm_100153.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:116110327
End:116110349
Strand:+
TSS Score:1
Start of the center position in the TSS region:116110338
End of the center position in the TSS region:116110339



Gene and protein annotation


Transcript_name:
Distance:
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Gene_name:Trim47
Gene_symbol:
Gene_synonyms:
Gene_source:



Transcript annotation


Transcript_name:
Distance:
Num_trans:0
All_trans:



TATA-Box annotation


Distance to TSS:-103
Nearest PromoterID:NM_172570
Entrez ID:217333
Nearest Unigene:Mm.347770
Nearest Refseq:NM_172570
Nearest Ensembl:ENSMUSG00000020773
Gene Name:Trim47
Gene Alias:2210023F24Rik
Gene Description:tripartite motif-containing 47
Gene Type:protein-coding
CpG%:0.105
GC%:0.771144
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):