Difference between revisions of "TSS:Mm 100183.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000116318.2:0 NM_001163318:0 uc007mlx.2:0 DQ390337:0 ENSMUST00000156088.1:39 |chr=chr11 |cpg_percent=0.025 |distance=0 |distance_to_tss=4 |end=...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |OTTMUSG00000003947= | ||
|all_trans=ENSMUST00000116318.2:0 NM_001163318:0 uc007mlx.2:0 DQ390337:0 ENSMUST00000156088.1:39 | |all_trans=ENSMUST00000116318.2:0 NM_001163318:0 uc007mlx.2:0 DQ390337:0 ENSMUST00000156088.1:39 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=4 | |distance_to_tss=4 | ||
|end=116657117 | |end=116657117 | ||
| + | |end_of_center_position=116657112 | ||
|entrez_id=100038570 | |entrez_id=100038570 | ||
|gc_percent=0.557214 | |gc_percent=0.557214 | ||
| − | |gene_alias=Gm11744 | + | |gene_alias=Gm11744 |
|gene_description=progressive rod cone degeneration protein | |gene_description=progressive rod cone degeneration protein | ||
|gene_id=100038570 | |gene_id=100038570 | ||
| Line 24: | Line 26: | ||
|species=mouse | |species=mouse | ||
|start=116657106 | |start=116657106 | ||
| + | |start_of_center_position=116657111 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000116318.2 NM_001163318 uc007mlx.2 DQ390337 | |transcript_name=ENSMUST00000116318.2 NM_001163318 uc007mlx.2 DQ390337 | ||
Revision as of 12:24, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 116657111 |
|---|---|
| End of the center position in the TSS region: | 116657112 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000116318.2 NM_001163318 uc007mlx.2 DQ390337 |
|---|---|
| Distance: | 0 |
| Num_trans: | 5 |
| All_trans: | ENSMUST00000116318.2:0 NM_001163318:0 uc007mlx.2:0 DQ390337:0 ENSMUST00000156088.1:39 |
TATA-Box annotation
| Distance to TSS: | 4 |
|---|---|
| Nearest PromoterID: | NM_001163318 |
| Entrez ID: | 100038570 |
| Nearest Unigene: | Mm.390349 |
| Nearest Refseq: | NM_001163318 |
| Nearest Ensembl: | ENSMUSG00000075410 |
| Gene Name: | predicted gene 11744 |
| Gene Alias: | Gm11744 |
| Gene Description: | progressive rod cone degeneration protein |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.557214 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
