Difference between revisions of "TSS:Mm 100185.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000156088.1:-358 ENSMUST00000116318.2:-406 NM_001163318:-406 uc007mlx.2:-406 DQ390337:-406 |chr=chr11 |cpg_percent=0.02 |distance=-358 |distanc...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |OTTMUSG00000003947= | ||
|all_trans=ENSMUST00000156088.1:-358 ENSMUST00000116318.2:-406 NM_001163318:-406 uc007mlx.2:-406 DQ390337:-406 | |all_trans=ENSMUST00000156088.1:-358 ENSMUST00000116318.2:-406 NM_001163318:-406 uc007mlx.2:-406 DQ390337:-406 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=417 | |distance_to_tss=417 | ||
|end=116657536 | |end=116657536 | ||
| + | |end_of_center_position=116657525 | ||
|entrez_id=100038570 | |entrez_id=100038570 | ||
|gc_percent=0.60199 | |gc_percent=0.60199 | ||
| − | |gene_alias=Gm11744 | + | |gene_alias=Gm11744 |
|gene_description=progressive rod cone degeneration protein | |gene_description=progressive rod cone degeneration protein | ||
|gene_id=100038570 | |gene_id=100038570 | ||
| Line 24: | Line 26: | ||
|species=mouse | |species=mouse | ||
|start=116657513 | |start=116657513 | ||
| + | |start_of_center_position=116657524 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000156088.1 | |transcript_name=ENSMUST00000156088.1 | ||
Revision as of 12:24, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 116657524 |
|---|---|
| End of the center position in the TSS region: | 116657525 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000156088.1 |
|---|---|
| Distance: | -358 |
| Num_trans: | 5 |
| All_trans: | ENSMUST00000156088.1:-358 ENSMUST00000116318.2:-406 NM_001163318:-406 uc007mlx.2:-406 DQ390337:-406 |
TATA-Box annotation
| Distance to TSS: | 417 |
|---|---|
| Nearest PromoterID: | NM_001163318 |
| Entrez ID: | 100038570 |
| Nearest Unigene: | Mm.390349 |
| Nearest Refseq: | NM_001163318 |
| Nearest Ensembl: | ENSMUSG00000075410 |
| Gene Name: | predicted gene 11744 |
| Gene Alias: | Gm11744 |
| Gene Description: | progressive rod cone degeneration protein |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.60199 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
