Difference between revisions of "TSS:Mm 100209.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000135135.1:0 ENSMUST00000125920.1:-163 uc007mmp.1:-163 AK080006:-163 ENSMUST00000136012.7:281 uc007mmq.1:281 uc007mmr.1:281 BC100547:281 ENSMU...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |MRF-1= | ||
| + | |Pr264= | ||
| + | |SC35= | ||
| + | |Sfrs10= | ||
| + | |Sfrs2= | ||
|all_trans=ENSMUST00000135135.1:0 ENSMUST00000125920.1:-163 uc007mmp.1:-163 AK080006:-163 ENSMUST00000136012.7:281 uc007mmq.1:281 uc007mmr.1:281 BC100547:281 ENSMUST00000126661.1:298 AK007898:298 ENSMUST00000021173.13:339 AK032043:339 AK031384:341 ENSMUST00000151944.2:348 ENSMUST00000106365.8:414 BC079583:414 | |all_trans=ENSMUST00000135135.1:0 ENSMUST00000125920.1:-163 uc007mmp.1:-163 AK080006:-163 ENSMUST00000136012.7:281 uc007mmq.1:281 uc007mmr.1:281 BC100547:281 ENSMUST00000126661.1:298 AK007898:298 ENSMUST00000021173.13:339 AK032043:339 AK031384:341 ENSMUST00000151944.2:348 ENSMUST00000106365.8:414 BC079583:414 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 11: | ||
|distance_to_tss=-375 | |distance_to_tss=-375 | ||
|end=116853481 | |end=116853481 | ||
| + | |end_of_center_position=116853470 | ||
|entrez_id=20382 | |entrez_id=20382 | ||
|gc_percent=0.676617 | |gc_percent=0.676617 | ||
| − | |gene_alias=D11Wsu175e | + | |gene_alias=D11Wsu175e |
|gene_description=serine/arginine-rich splicing factor 2 | |gene_description=serine/arginine-rich splicing factor 2 | ||
|gene_id=69900 | |gene_id=69900 | ||
| Line 24: | Line 30: | ||
|species=mouse | |species=mouse | ||
|start=116853457 | |start=116853457 | ||
| + | |start_of_center_position=116853469 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000135135.1 | |transcript_name=ENSMUST00000135135.1 | ||
Revision as of 12:30, 12 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 116853469 |
|---|---|
| End of the center position in the TSS region: | 116853470 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000135135.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 16 |
| All_trans: | ENSMUST00000135135.1:0 ENSMUST00000125920.1:-163 uc007mmp.1:-163 AK080006:-163 ENSMUST00000136012.7:281 uc007mmq.1:281 uc007mmr.1:281 BC100547:281 ENSMUST00000126661.1:298 AK007898:298 ENSMUST00000021173.13:339 AK032043:339 AK031384:341 ENSMUST00000151944.2:348 ENSMUST00000106365.8:414 BC079583:414 |
TATA-Box annotation
| Distance to TSS: | -375 |
|---|---|
| Nearest PromoterID: | NM_011358 |
| Entrez ID: | 20382 |
| Nearest Unigene: | Mm.21841 |
| Nearest Refseq: | NM_011358 |
| Nearest Ensembl: | ENSMUSG00000034120 |
| Gene Name: | major facilitator superfamily domain containing 11 |
| Gene Alias: | D11Wsu175e |
| Gene Description: | serine/arginine-rich splicing factor 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.676617 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
