Difference between revisions of "TSS:Mm 100214.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000103027.9:0 NM_172948:0 uc007mmu.1:0 uc033gbm.1:0 BC094604:0 BC063084:0 |chr=chr11 |cpg_percent=0.165 |distance=0 |distance_to_tss=3 |end=116...") |
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| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |GnT-IX= | ||
|all_trans=ENSMUST00000103027.9:0 NM_172948:0 uc007mmu.1:0 uc033gbm.1:0 BC094604:0 BC063084:0 | |all_trans=ENSMUST00000103027.9:0 NM_172948:0 uc007mmu.1:0 uc033gbm.1:0 BC094604:0 BC063084:0 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=3 | |distance_to_tss=3 | ||
|end=116918888 | |end=116918888 | ||
| + | |end_of_center_position=116918867 | ||
|entrez_id=268510 | |entrez_id=268510 | ||
|gc_percent=0.771144 | |gc_percent=0.771144 | ||
| − | |gene_alias=C330018B01 | + | |gene_alias=C330018B01 |
|gene_description="mannoside acetylglucosaminyltransferase 5, isoenzyme B" | |gene_description="mannoside acetylglucosaminyltransferase 5, isoenzyme B" | ||
|gene_id=268510 | |gene_id=268510 | ||
| Line 17: | Line 19: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=MGI:3606200 | |hgnc_mgi_id=MGI:3606200 | ||
| + | |mGnTVB= | ||
|nearest_ensembl=ENSMUSG00000043857 | |nearest_ensembl=ENSMUSG00000043857 | ||
|nearest_promoter_id=NM_172948 | |nearest_promoter_id=NM_172948 | ||
| Line 24: | Line 27: | ||
|species=mouse | |species=mouse | ||
|start=116918844 | |start=116918844 | ||
| + | |start_of_center_position=116918866 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000103027.9 NM_172948 uc007mmu.1 uc033gbm.1 BC094604 BC063084 | |transcript_name=ENSMUST00000103027.9 NM_172948 uc007mmu.1 uc033gbm.1 BC094604 BC063084 | ||
Revision as of 12:30, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 116918866 |
|---|---|
| End of the center position in the TSS region: | 116918867 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000103027.9 NM_172948 uc007mmu.1 uc033gbm.1 BC094604 BC063084 |
|---|---|
| Distance: | 0 |
| Num_trans: | 6 |
| All_trans: | ENSMUST00000103027.9:0 NM_172948:0 uc007mmu.1:0 uc033gbm.1:0 BC094604:0 BC063084:0 |
TATA-Box annotation
| Distance to TSS: | 3 |
|---|---|
| Nearest PromoterID: | NM_172948 |
| Entrez ID: | 268510 |
| Nearest Unigene: | Mm.35141 |
| Nearest Refseq: | NM_172948 |
| Nearest Ensembl: | ENSMUSG00000043857 |
| Gene Name: | "mannoside acetylglucosaminyltransferase 5, isoenzyme B" |
| Gene Alias: | C330018B01 |
| Gene Description: | "mannoside acetylglucosaminyltransferase 5, isoenzyme B" |
| Gene Type: | protein-coding |
| CpG%: | 0.165 |
| GC%: | 0.771144 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
