Difference between revisions of "TSS:Mm 100218.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=BC037520:11 ENSMUST00000182811.1:-40 AK171830:-40 ENSMUST00000145438.1:-52 ENSMUST00000149822.1:-52 AK012687:-52 NR_027059:-59 uc007mmx.2:-59 ENSMUST000...") |
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|distance_to_tss=64 | |distance_to_tss=64 | ||
|end=117076852 | |end=117076852 | ||
| + | |end_of_center_position=117076847 | ||
|entrez_id=76972 | |entrez_id=76972 | ||
|gc_percent=0.656716 | |gc_percent=0.656716 | ||
| Line 24: | Line 25: | ||
|species=mouse | |species=mouse | ||
|start=117076841 | |start=117076841 | ||
| + | |start_of_center_position=117076846 | ||
|strand=+ | |strand=+ | ||
|transcript_name=BC037520 | |transcript_name=BC037520 | ||
Revision as of 12:31, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 117076846 |
|---|---|
| End of the center position in the TSS region: | 117076847 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BC037520 |
|---|---|
| Distance: | 11 |
| Num_trans: | 9 |
| All_trans: | BC037520:11 ENSMUST00000182811.1:-40 AK171830:-40 ENSMUST00000145438.1:-52 ENSMUST00000149822.1:-52 AK012687:-52 NR_027059:-59 uc007mmx.2:-59 ENSMUST00000157904.1:391 |
TATA-Box annotation
| Distance to TSS: | 64 |
|---|---|
| Nearest PromoterID: | NR_027059 |
| Entrez ID: | 76972 |
| Nearest Unigene: | Mm.309167 |
| Nearest Refseq: | NR_027059 |
| Nearest Ensembl: | ENSMUSG00000086859 |
| Gene Name: | small nucleolar RNA host gene 20 |
| Gene Alias: | 2810008D09Rik |
| Gene Description: | small nucleolar RNA host gene 20 |
| Gene Type: | ncRNA |
| CpG%: | 0.095 |
| GC%: | 0.656716 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
