Difference between revisions of "TSS:Mm 100219.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000157904.1:38 BC037520:-310 ENSMUST00000182811.1:-371 AK171830:-371 ENSMUST00000145438.1:-383 ENSMUST00000149822.1:-383 AK012687:-383 NR_02705...") |
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| Line 6: | Line 6: | ||
|distance_to_tss=-159 | |distance_to_tss=-159 | ||
|end=117077205 | |end=117077205 | ||
| + | |end_of_center_position=117077189 | ||
|entrez_id=102465258 | |entrez_id=102465258 | ||
|gc_percent=0.587065 | |gc_percent=0.587065 | ||
| Line 24: | Line 25: | ||
|species=mouse | |species=mouse | ||
|start=117077172 | |start=117077172 | ||
| + | |start_of_center_position=117077188 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000157904.1 | |transcript_name=ENSMUST00000157904.1 | ||
Revision as of 12:31, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 117077188 |
|---|---|
| End of the center position in the TSS region: | 117077189 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000157904.1 |
|---|---|
| Distance: | 38 |
| Num_trans: | 9 |
| All_trans: | ENSMUST00000157904.1:38 BC037520:-310 ENSMUST00000182811.1:-371 AK171830:-371 ENSMUST00000145438.1:-383 ENSMUST00000149822.1:-383 AK012687:-383 NR_027059:-390 uc007mmx.2:-390 |
TATA-Box annotation
| Distance to TSS: | -159 |
|---|---|
| Nearest PromoterID: | NR_105853 |
| Entrez ID: | 102465258 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_105853 |
| Nearest Ensembl: | ENSMUSG00000104740 |
| Gene Name: | "predicted gene, 26083" |
| Gene Alias: | mmu-mir-6516 |
| Gene Description: | microRNA 6516 |
| Gene Type: | ncRNA |
| CpG%: | 0.05 |
| GC%: | 0.587065 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
