Difference between revisions of "TSS:Mm 100226.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000146585.1:-8 BC055849:-8 AK004818:-11 ENSMUST00000103026.9:-22 ENSMUST00000090433.5:-22 BC005766:-22 BC086620:-22 ENSMUST00000021177.14:-88 N...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |2810012L19Rik= | ||
| + | |Naa-35= | ||
|all_trans=ENSMUST00000146585.1:-8 BC055849:-8 AK004818:-11 ENSMUST00000103026.9:-22 ENSMUST00000090433.5:-22 BC005766:-22 BC086620:-22 ENSMUST00000021177.14:-88 NR_029459:-88 NM_001166506:-88 NM_001166507:-88 NM_028777:-88 uc007mmz.2:-88 uc007mna.2:-88 uc007mnb.2:-88 uc011yih.1:-88 uc007mnc.2:-88 ENSMUST00000127090.7:-92 AK047396:-92 | |all_trans=ENSMUST00000146585.1:-8 BC055849:-8 AK004818:-11 ENSMUST00000103026.9:-22 ENSMUST00000090433.5:-22 BC005766:-22 BC086620:-22 ENSMUST00000021177.14:-88 NR_029459:-88 NM_001166506:-88 NM_001166507:-88 NM_028777:-88 uc007mmz.2:-88 uc007mna.2:-88 uc007mnb.2:-88 uc011yih.1:-88 uc007mnc.2:-88 ENSMUST00000127090.7:-92 AK047396:-92 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=100 | |distance_to_tss=100 | ||
|end=117115285 | |end=117115285 | ||
| + | |end_of_center_position=117115273 | ||
|entrez_id=74136 | |entrez_id=74136 | ||
|gc_percent=0.736318 | |gc_percent=0.736318 | ||
| − | |gene_alias=1200017E04Rik | + | |gene_alias=1200017E04Rik |
|gene_description=SEC14-like lipid binding 1 | |gene_description=SEC14-like lipid binding 1 | ||
|gene_id=74136 | |gene_id=74136 | ||
| Line 24: | Line 27: | ||
|species=mouse | |species=mouse | ||
|start=117115259 | |start=117115259 | ||
| + | |start_of_center_position=117115272 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000146585.1 BC055849 | |transcript_name=ENSMUST00000146585.1 BC055849 | ||
Revision as of 12:32, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 117115272 |
|---|---|
| End of the center position in the TSS region: | 117115273 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000146585.1 BC055849 |
|---|---|
| Distance: | -8 |
| Num_trans: | 19 |
| All_trans: | ENSMUST00000146585.1:-8 BC055849:-8 AK004818:-11 ENSMUST00000103026.9:-22 ENSMUST00000090433.5:-22 BC005766:-22 BC086620:-22 ENSMUST00000021177.14:-88 NR_029459:-88 NM_001166506:-88 NM_001166507:-88 NM_028777:-88 uc007mmz.2:-88 uc007mna.2:-88 uc007mnb.2:-88 uc011yih.1:-88 uc007mnc.2:-88 ENSMUST00000127090.7:-92 AK047396:-92 |
TATA-Box annotation
| Distance to TSS: | 100 |
|---|---|
| Nearest PromoterID: | NM_001166506 |
| Entrez ID: | 74136 |
| Nearest Unigene: | Mm.272312 |
| Nearest Refseq: | NM_028777 |
| Nearest Ensembl: | ENSMUSG00000020823 |
| Gene Name: | SEC14-like lipid binding 1 |
| Gene Alias: | 1200017E04Rik |
| Gene Description: | SEC14-like lipid binding 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.15 |
| GC%: | 0.736318 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
