Difference between revisions of "TSS:Mm 100237.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000106354.8:0 |chr=chr11 |cpg_percent=0.065 |distance=0 |distance_to_tss=32631 |end=117232329 |entrez_id=53860 |gc_percent=0.676617 |gene_alias...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |Msf= | ||
| + | |PNUTL4= | ||
| + | |Sint1= | ||
|all_trans=ENSMUST00000106354.8:0 | |all_trans=ENSMUST00000106354.8:0 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 9: | ||
|distance_to_tss=32631 | |distance_to_tss=32631 | ||
|end=117232329 | |end=117232329 | ||
| + | |end_of_center_position=117232292 | ||
|entrez_id=53860 | |entrez_id=53860 | ||
|gc_percent=0.676617 | |gc_percent=0.676617 | ||
| − | |gene_alias=MSF1 | + | |gene_alias=MSF1 |
|gene_description=septin 9 | |gene_description=septin 9 | ||
|gene_id=53860 | |gene_id=53860 | ||
| Line 24: | Line 28: | ||
|species=mouse | |species=mouse | ||
|start=117232254 | |start=117232254 | ||
| + | |start_of_center_position=117232291 | ||
|strand=+ | |strand=+ | ||
|tata_box="-95(GGATATTAAAAG,-,0.00)" | |tata_box="-95(GGATATTAAAAG,-,0.00)" | ||
Revision as of 12:32, 12 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 117232291 |
|---|---|
| End of the center position in the TSS region: | 117232292 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000106354.8 |
|---|---|
| Distance: | 0 |
| Num_trans: | 1 |
| All_trans: | ENSMUST00000106354.8:0 |
TATA-Box annotation
| Distance to TSS: | 32631 |
|---|---|
| Nearest PromoterID: | NM_001113486 |
| Entrez ID: | 53860 |
| Nearest Unigene: | Mm.38450 |
| Nearest Refseq: | NM_017380 |
| Nearest Ensembl: | ENSMUSG00000059248 |
| Gene Name: | septin 9 |
| Gene Alias: | MSF1 |
| Gene Description: | septin 9 |
| Gene Type: | protein-coding |
| CpG%: | 0.065 |
| GC%: | 0.676617 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-95(GGATATTAAAAG,-,0.00)" |
