Difference between revisions of "TSS:Mm 100272.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK137381:170 |chr=chr11 |cpg_percent=0.025 |distance=170 |distance_to_tss=18403 |end=117762220 |entrez_id=217353 |gc_percent=0.363184 |gene_alias=D11Ert...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |EVER1= | ||
|all_trans=AK137381:170 | |all_trans=AK137381:170 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=18403 | |distance_to_tss=18403 | ||
|end=117762220 | |end=117762220 | ||
| + | |end_of_center_position=117762218 | ||
|entrez_id=217353 | |entrez_id=217353 | ||
|gc_percent=0.363184 | |gc_percent=0.363184 | ||
| − | |gene_alias=D11Ertd204e | + | |gene_alias=D11Ertd204e |
|gene_description=transmembrane channel-like gene family 6 | |gene_description=transmembrane channel-like gene family 6 | ||
|gene_id=217351 | |gene_id=217351 | ||
| Line 24: | Line 26: | ||
|species=mouse | |species=mouse | ||
|start=117762215 | |start=117762215 | ||
| + | |start_of_center_position=117762217 | ||
|strand=+ | |strand=+ | ||
|transcript_name=AK137381 | |transcript_name=AK137381 | ||
Revision as of 12:36, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 117762217 |
|---|---|
| End of the center position in the TSS region: | 117762218 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK137381 |
|---|---|
| Distance: | 170 |
| Num_trans: | 1 |
| All_trans: | AK137381:170 |
TATA-Box annotation
| Distance to TSS: | 18403 |
|---|---|
| Nearest PromoterID: | NM_181321 |
| Entrez ID: | 217353 |
| Nearest Unigene: | Mm.286963 |
| Nearest Refseq: | NM_145439 |
| Nearest Ensembl: | ENSMUSG00000025572 |
| Gene Name: | trinucleotide repeat containing 6C |
| Gene Alias: | D11Ertd204e |
| Gene Description: | transmembrane channel-like gene family 6 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.363184 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
